Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR010977
- Description
- Aromatic-L-amino-acid decarboxylase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00024 | 13 | CH_atr_313 | 3 | 12 | 0.0000720491 |
Brassica rapa | A07 | 13 | CH_bra_474 | 2 | 2 | 0.000744325 |
Brassica rapa | A09 | 13 | CH_bra_473 | 2 | 2 | 0.000744325 |
Capsella rubella | scaffold_3 | 13 | CH_cru_184 | 3 | 3 | 0.0000000349537 |
Fragaria vesca | LG3 | 13 | CH_fve_319 | 3 | 8 | 0.00000602077 |
Physcomitrella patens | scaffold_102 | 13 | CH_ppa_6 | 4 | 9 | 0.000000000109217 |
Populus trichocarpa | Chr13 | 13 | CH_ptr_720 | 2 | 2 | 0.00049802 |
Prunus persica | scaffold_4 | 13 | CH_ppe_191 | 4 | 5 | 0.000000000196648 |
Solanum tuberosum | chr07 | 13 | CH_stu_470 | 3 | 3 | 0.000000272267 |
Theobroma cacao | scaffold_5 | 13 | CH_tca_259 | 3 | 3 | 0.000000243991 |
Vitis vinifera | chr4 | 13 | CH_vvi_355 | 3 | 5 | 0.00000296895 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |