Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR009003
- Description
- Trypsin-like cysteine/serine peptidase domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Manihot esculenta | scaffold06871 | 13 | CH_mes_178 | 3 | 3 | 0.00000491883 |
Oryza sativa ssp. japonica | 5 | 13 | CH_osa_172 | 8 | 60 | 0.000000000109093 |
Oryza sativa ssp. japonica | 5 | 13 | CH_osa_332 | 5 | 16 | 0.000000241208 |
Oryza sativa ssp. japonica | 7 | 13 | CH_osa_449 | 4 | 9 | 0.00000725745 |
Oryza sativa ssp. japonica | 8 | 13 | CH_osa_564 | 5 | 41 | 0.0000405574 |
Oryza sativa ssp. japonica | 9 | 13 | CH_osa_102 | 6 | 6 | 0.0000000000000526846 |
Oryza sativa ssp. japonica | 5 | 14 | CH_osa_57 | 13 | 180 | 3.8634e-16 |
Oryza sativa ssp. japonica | 9 | 15 | CH_osa_11 | 4 | 5 | 0.0000000502783 |
Populus trichocarpa | Chr18 | 13 | CH_ptr_175 | 5 | 7 | 0.0000000000411528 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |