Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR007750
- Description
- Protein of unknown function DUF674
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 13 | CH_aly_301 | 3 | 3 | 0.0000057943 |
Arabidopsis lyrata | scaffold_3 | 13 | CH_aly_339 | 3 | 4 | 0.0000231677 |
Arabidopsis lyrata | scaffold_6 | 13 | CH_aly_160 | 4 | 5 | 0.0000000146284 |
Arabidopsis thaliana | 3 | 13 | CH_ath_266 | 3 | 4 | 0.00000255032 |
Arabidopsis thaliana | 5 | 13 | CH_ath_107 | 4 | 4 | 0.000000000132854 |
Beta vulgaris | Bvchr2.sca001 | 13 | CH_bvu_129 | 3 | 3 | 0.0000000139871 |
Capsella rubella | scaffold_6 | 13 | CH_cru_545 | 2 | 2 | 0.000763242 |
Citrullus lanatus | Chr7 | 13 | CH_cla_118 | 3 | 3 | 0.000000010867 |
Citrus sinensis | scaffold00024 | 13 | CH_csi_7 | 9 | 14 | 9.19746e-26 |
Eucalyptus grandis | scaffold_10 | 13 | CH_egr_56 | 9 | 9 | 1.92647e-31 |
Fragaria vesca | LG3 | 13 | CH_fve_163 | 5 | 11 | 0.00000000235952 |
Fragaria vesca | LG7 | 13 | CH_fve_13 | 13 | 39 | 1.35404e-28 |
Fragaria vesca | LG7 | 14 | CH_fve_13 | 13 | 39 | 1.35404e-28 |
Glycine max | Gm07 | 13 | CH_gma_150 | 6 | 22 | 0.0000000000342729 |
Glycine max | Gm18 | 13 | CH_gma_52 | 7 | 10 | 2.15153e-17 |
Gossypium raimondii | Chr02 | 13 | CH_gra_211 | 4 | 5 | 0.0000000341883 |
Gossypium raimondii | Chr11 | 13 | CH_gra_3 | 18 | 21 | 2.39828e-53 |
Gossypium raimondii | Chr11 | 14 | CH_gra_4 | 18 | 21 | 2.39828e-53 |
Lotus japonicus | chr5 | 13 | CH_lja_35 | 4 | 8 | 0.00000000223235 |
Malus domestica | 1 | 13 | CH_mdo_43 | 5 | 15 | 0.000000000131369 |
Malus domestica | 11 | 13 | CH_mdo_86 | 4 | 8 | 0.0000000073796 |
Manihot esculenta | scaffold08265 | 13 | CH_mes_148 | 3 | 4 | 0.00000108089 |
Medicago truncatula | chr1 | 13 | CH_mtr_297 | 5 | 6 | 0.000000000384694 |
Medicago truncatula | chr4 | 13 | CH_mtr_627 | 4 | 7 | 0.00000231841 |
Medicago truncatula | chr4 | 13 | CH_mtr_489 | 6 | 38 | 0.000000164131 |
Medicago truncatula | chr7 | 13 | CH_mtr_21 | 15 | 25 | 5.8648e-35 |
Medicago truncatula | chr7 | 13 | CH_mtr_25 | 16 | 41 | 1.4591e-33 |
Medicago truncatula | chr7 | 13 | CH_mtr_1030 | 3 | 4 | 0.000270323 |
Medicago truncatula | chr8 | 13 | CH_mtr_581 | 4 | 6 | 0.000000994387 |
Medicago truncatula | chr4 | 14 | CH_mtr_116 | 10 | 114 | 0.0000000000025754 |
Medicago truncatula | chr7 | 14 | CH_mtr_4 | 30 | 200 | 2.42641e-53 |
Oryza sativa ssp. japonica | 1 | 13 | CH_osa_23 | 9 | 13 | 1.90451e-27 |
Physcomitrella patens | scaffold_13 | 13 | CH_ppa_118 | 2 | 2 | 0.000396668 |
Populus trichocarpa | Chr10 | 13 | CH_ptr_191 | 4 | 5 | 0.000000000129693 |
Prunus persica | scaffold_2 | 13 | CH_ppe_115 | 6 | 8 | 0.0000000000000914275 |
Prunus persica | scaffold_6 | 13 | CH_ppe_124 | 6 | 9 | 0.000000000000274137 |
Ricinus communis | 28180 | 13 | CH_rco_154 | 3 | 3 | 0.00000014465 |
Ricinus communis | 29751 | 13 | CH_rco_436 | 2 | 2 | 0.000981981 |
Solanum lycopersicum | ch06 | 13 | CH_sly_289 | 3 | 3 | 0.000000276517 |
Solanum tuberosum | chr06 | 13 | CH_stu_304 | 4 | 4 | 0.000000000554176 |
Solanum tuberosum | chr09 | 13 | CH_stu_121 | 6 | 7 | 2.82893e-16 |
Theobroma cacao | scaffold_10r | 13 | CH_tca_140 | 4 | 5 | 0.000000000166323 |
Theobroma cacao | scaffold_9 | 13 | CH_tca_306 | 3 | 4 | 0.000000975829 |
Vitis vinifera | chr13 | 13 | CH_vvi_27 | 9 | 10 | 1.03859e-26 |
Zea mays | 2 | 13 | CH_zma_413 | 3 | 12 | 0.000183307 |
Zea mays | 3 | 13 | CH_zma_21 | 7 | 15 | 6.48927e-18 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |