Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR005508
- Description
- B3 domain-containing protein
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 13 | CH_aly_400 | 3 | 5 | 0.0000794568 |
Arabidopsis thaliana | 2 | 13 | CH_ath_519 | 4 | 50 | 0.000438443 |
Brassica rapa | A04 | 13 | CH_bra_97 | 6 | 76 | 0.0000000116582 |
Citrus sinensis | scaffold00246 | 13 | CH_csi_148 | 3 | 4 | 0.00000160935 |
Cucumis melo | CM3.5_scaffold00005 | 13 | CH_cme_237 | 4 | 58 | 0.0000396195 |
Eucalyptus grandis | scaffold_9 | 13 | CH_egr_483 | 5 | 25 | 0.000000000583702 |
Glycine max | Gm01 | 13 | CH_gma_149 | 4 | 4 | 0.0000000000319133 |
Gossypium raimondii | Chr08 | 13 | CH_gra_341 | 3 | 8 | 0.00000838837 |
Malus domestica | 1 | 13 | CH_mdo_535 | 2 | 2 | 0.000461585 |
Malus domestica | 1 | 15 | CH_mdo_21 | 2 | 2 | 0.000461585 |
Medicago truncatula | chr5 | 13 | CH_mtr_287 | 4 | 7 | 0.000000000212193 |
Prunus persica | scaffold_2 | 13 | CH_ppe_624 | 4 | 71 | 0.000226119 |
Prunus persica | scaffold_6 | 13 | CH_ppe_753 | 3 | 18 | 0.000760678 |
Solanum lycopersicum | ch02 | 13 | CH_sly_200 | 4 | 9 | 0.00000000499472 |
Solanum tuberosum | chr11 | 13 | CH_stu_1101 | 2 | 2 | 0.000853971 |
Theobroma cacao | scaffold_3 | 13 | CH_tca_242 | 3 | 6 | 0.000000139409 |
Theobroma cacao | scaffold_3 | 15 | CH_tca_15 | 2 | 5 | 0.00068164 |
Zea mays | 8 | 13 | CH_zma_391 | 2 | 2 | 0.000150875 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |