Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR004265
Description
Plant disease resistance response protein

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold0003413CH_atr_451340.000369895
Amborella trichopodascaffold0004113CH_atr_124292.48239e-62
Amborella trichopodascaffold0013413CH_atr_84690.0000000000223021
Amborella trichopodascaffold0004114CH_atr_224292.48239e-62
Arabidopsis lyratascaffold_313CH_aly_328330.0000155471
Arabidopsis lyratascaffold_613CH_aly_180450.0000000564126
Arabidopsis thaliana313CH_ath_320330.0000155439
Arabidopsis thaliana413CH_ath_395340.0000621404
Beta vulgaris0008.scaffold0002913CH_bvu_133440.0000000161686
Beta vulgarisBvchr4.sca00113CH_bvu_245330.0000186029
Beta vulgarisBvchr9.sca02513CH_bvu_63550.0000000000132728
Brassica rapaA0113CH_bra_286330.0000337554
Brassica rapaA0613CH_bra_287330.0000337554
Carica papayasupercontig_8513CH_cpa_19660.0000000000000024026
Citrullus lanatusChr713CH_cla_453370.00058421
Citrus sinensisscaffold0000913CH_csi_182330.0000112676
Citrus sinensisscaffold0004313CH_csi_935170.0000000362265
Cucumis meloCM3.5_scaffold0002213CH_cme_125440.00000000984367
Eucalyptus grandisscaffold_113CH_egr_1025330.000072662
Eucalyptus grandisscaffold_113CH_egr_8310101.79581e-25
Eucalyptus grandisscaffold_413CH_egr_644440.0000000891584
Eucalyptus grandisscaffold_513CH_egr_207771.42221e-16
Eucalyptus grandisscaffold_114CH_egr_8010101.79581e-25
Fragaria vescaLG113CH_fve_1907490.00000000964899
Fragaria vescaLG213CH_fve_158570.00000000194552
Fragaria vescaLG313CH_fve_44789.35227e-16
Fragaria vescaLG513CH_fve_118550.0000000000928253
Fragaria vescaLG613CH_fve_575340.000265248
Fragaria vescaLG713CH_fve_455330.0000663736
Fragaria vescaLG115CH_fve_354470.000546834
Glycine maxGm0113CH_gma_2465110.0000000224868
Glycine maxGm0313CH_gma_70790.00000000000000147413
Glycine maxGm0313CH_gma_158550.0000000000489038
Glycine maxGm1113CH_gma_734350.00053795
Glycine maxGm1913CH_gma_157550.0000000000489038
Gossypium raimondiiChr0213CH_gra_152550.000000000466063
Gossypium raimondiiChr0213CH_gra_197570.0000000097611
Gossypium raimondiiChr0913CH_gra_43992.59432e-21
Gossypium raimondiiChr1113CH_gra_494330.000178408
Gossypium raimondiiChr1113CH_gra_495330.000178408
Lotus japonicuschr413CH_lja_115330.00000246771
Manihot esculentascaffold0528013CH_mes_209330.0000208104
Manihot esculentascaffold0854213CH_mes_369360.000415306
Medicago truncatulachr413CH_mtr_5410181.84621e-23
Medicago truncatulachr413CH_mtr_1101360.000373408
Medicago truncatulachr713CH_mtr_320590.000000000907308
Medicago truncatulachr414CH_mtr_5710181.84621e-23
Oryza sativa ssp. japonica1013CH_osa_5354120.0000349744
Oryza sativa ssp. japonica1113CH_osa_137690.00000000000605542
Oryza sativa ssp. japonica1113CH_osa_1257170.00000000000136753
Oryza sativa ssp. japonica713CH_osa_2226200.00000000276786
Oryza sativa ssp. japonica713CH_osa_437480.00000496235
Physcomitrella patensscaffold_25213CH_ppa_27350.00000367036
Populus trichocarpaChr0113CH_ptr_320450.000000152297
Populus trichocarpaChr0113CH_ptr_511330.0000340013
Populus trichocarpaChr0313CH_ptr_509330.0000340013
Populus trichocarpaChr0313CH_ptr_319450.000000152297
Populus trichocarpaChr0913CH_ptr_510330.0000340013
Populus trichocarpaChr1013CH_ptr_508330.0000340013
Populus trichocarpaChr1613CH_ptr_280440.0000000304815
Prunus persicascaffold_213CH_ppe_571340.000140037
Prunus persicascaffold_213CH_ppe_481330.000035037
Prunus persicascaffold_313CH_ppe_341460.00000052956
Prunus persicascaffold_513CH_ppe_193560.000000000206326
Prunus persicascaffold_613CH_ppe_271440.0000000353616
Prunus persicascaffold_813CH_ppe_391480.00000246725
Ricinus communis2975613CH_rco_256340.0000471854
Ricinus communis3019013CH_rco_231330.0000118034
Ricinus communis2990415CH_rco_93120.000697712
Solanum lycopersicumch0213CH_sly_437330.0000221954
Solanum lycopersicumch0813CH_sly_436330.0000221954
Solanum lycopersicumch1013CH_sly_1776230.00000000102865
Solanum tuberosumchr0813CH_stu_635330.00000984051
Theobroma cacaoscaffold_10r13CH_tca_438330.0000497741
Theobroma cacaoscaffold_213CH_tca_1711126.09646e-28
Theobroma cacaoscaffold_313CH_tca_269450.0000002797
Theobroma cacaoscaffold_513CH_tca_1116100.0000000000135054
Theobroma cacaoscaffold_214CH_tca_1711126.09646e-28
Vitis viniferachr1213CH_vvi_388330.00000692398
Vitis viniferachr613CH_vvi_235460.0000000585358
Vitis viniferachr813CH_vvi_236460.0000000585358
Zea mays713CH_zma_299330.0000468215

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V