Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR003663
- Description
- Sugar/inositol transporter
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00111 | 13 | CH_atr_357 | 3 | 3 | 0.0000856356 |
Arabidopsis lyrata | scaffold_1 | 13 | CH_aly_253 | 4 | 5 | 0.0000011042 |
Arabidopsis thaliana | 1 | 13 | CH_ath_231 | 4 | 5 | 0.000000925152 |
Arabidopsis thaliana | 3 | 13 | CH_ath_230 | 4 | 5 | 0.000000925152 |
Brassica rapa | A10 | 13 | CH_bra_375 | 3 | 3 | 0.000270183 |
Capsella rubella | scaffold_3 | 13 | CH_cru_424 | 3 | 3 | 0.00015114 |
Capsella rubella | scaffold_6 | 13 | CH_cru_425 | 3 | 3 | 0.00015114 |
Carica papaya | supercontig_62 | 13 | CH_cpa_373 | 3 | 5 | 0.000412781 |
Citrullus lanatus | Chr0 | 13 | CH_cla_395 | 3 | 3 | 0.000301232 |
Citrullus lanatus | Chr5 | 13 | CH_cla_101 | 5 | 5 | 0.00000000150387 |
Citrus sinensis | scaffold00011 | 13 | CH_csi_279 | 3 | 4 | 0.000263359 |
Citrus sinensis | scaffold00224 | 13 | CH_csi_103 | 4 | 4 | 0.0000000954353 |
Cucumis melo | CM3.5_scaffold00006 | 13 | CH_cme_155 | 4 | 4 | 0.0000002005 |
Eucalyptus grandis | scaffold_2 | 13 | CH_egr_66 | 13 | 14 | 1.80917e-28 |
Eucalyptus grandis | scaffold_6 | 13 | CH_egr_1284 | 3 | 3 | 0.00077883 |
Eucalyptus grandis | scaffold_8 | 13 | CH_egr_794 | 4 | 4 | 0.00000216158 |
Eucalyptus grandis | scaffold_8 | 13 | CH_egr_947 | 4 | 6 | 0.0000322795 |
Eucalyptus grandis | scaffold_9 | 13 | CH_egr_793 | 4 | 4 | 0.00000216158 |
Eucalyptus grandis | scaffold_2 | 14 | CH_egr_66 | 13 | 14 | 1.80917e-28 |
Fragaria vesca | LG2 | 13 | CH_fve_307 | 4 | 6 | 0.000003287 |
Fragaria vesca | LG3 | 13 | CH_fve_490 | 3 | 3 | 0.0001411 |
Fragaria vesca | LG4 | 13 | CH_fve_67 | 8 | 20 | 0.000000000000131388 |
Glycine max | Gm04 | 13 | CH_gma_716 | 3 | 3 | 0.000396169 |
Glycine max | Gm10 | 13 | CH_gma_715 | 3 | 3 | 0.000396169 |
Glycine max | Gm11 | 13 | CH_gma_139 | 6 | 7 | 0.000000000018605 |
Gossypium raimondii | Chr02 | 13 | CH_gra_253 | 4 | 4 | 0.000000329799 |
Gossypium raimondii | Chr06 | 13 | CH_gra_580 | 3 | 4 | 0.000782779 |
Malus domestica | 11 | 13 | CH_mdo_513 | 3 | 4 | 0.000459621 |
Malus domestica | 12 | 13 | CH_mdo_6 | 10 | 25 | 1.95645e-18 |
Malus domestica | 9 | 13 | CH_mdo_80 | 5 | 7 | 0.00000000424468 |
Malus domestica | 12 | 14 | CH_mdo_4 | 10 | 25 | 1.95645e-18 |
Manihot esculenta | scaffold04285 | 13 | CH_mes_144 | 4 | 4 | 0.000000942247 |
Medicago truncatula | chr3 | 13 | CH_mtr_47 | 11 | 14 | 9.44869e-26 |
Medicago truncatula | chr3 | 14 | CH_mtr_49 | 11 | 14 | 9.44869e-26 |
Oryza sativa ssp. japonica | 11 | 13 | CH_osa_730 | 3 | 4 | 0.000318017 |
Populus trichocarpa | Chr07 | 13 | CH_ptr_625 | 4 | 12 | 0.00017631 |
Populus trichocarpa | Chr08 | 13 | CH_ptr_407 | 4 | 5 | 0.00000179795 |
Populus trichocarpa | Chr13 | 13 | CH_ptr_791 | 3 | 4 | 0.000849469 |
Prunus persica | scaffold_1 | 13 | CH_ppe_72 | 10 | 24 | 5.38694e-17 |
Prunus persica | scaffold_2 | 13 | CH_ppe_633 | 3 | 3 | 0.000266733 |
Prunus persica | scaffold_8 | 13 | CH_ppe_169 | 9 | 52 | 0.0000000000523051 |
Prunus persica | scaffold_1 | 14 | CH_ppe_50 | 10 | 24 | 5.38694e-17 |
Ricinus communis | 30128 | 13 | CH_rco_89 | 5 | 5 | 0.00000000075759 |
Solanum tuberosum | chr12 | 13 | CH_stu_536 | 4 | 5 | 0.00000144264 |
Theobroma cacao | scaffold_2 | 13 | CH_tca_500 | 3 | 3 | 0.000145174 |
Theobroma cacao | scaffold_3 | 13 | CH_tca_343 | 4 | 6 | 0.00000355368 |
Theobroma cacao | scaffold_4 | 13 | CH_tca_606 | 3 | 4 | 0.000579965 |
Theobroma cacao | scaffold_5 | 13 | CH_tca_123 | 6 | 9 | 0.0000000000499286 |
Vitis vinifera | chr14 | 13 | CH_vvi_274 | 4 | 4 | 0.000000248374 |
Zea mays | 4 | 13 | CH_zma_122 | 5 | 8 | 0.000000025849 |
Zea mays | 6 | 13 | CH_zma_412 | 3 | 3 | 0.00018175 |
Zea mays | 8 | 13 | CH_zma_510 | 3 | 4 | 0.000726106 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |