Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR003593
- Description
- AAA+ ATPase domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 3 | 14 | CH_ath_26 | 12 | 31 | 0.00000000000284105 |
Brassica rapa | A06 | 14 | CH_bra_26 | 10 | 70 | 0.000162333 |
Capsella rubella | scaffold_5 | 14 | CH_cru_27 | 13 | 30 | 0.0000000000000477231 |
Eucalyptus grandis | scaffold_9 | 13 | CH_egr_109 | 16 | 20 | 3.39418e-23 |
Eucalyptus grandis | scaffold_9 | 14 | CH_egr_100 | 16 | 20 | 3.39418e-23 |
Fragaria vesca | LG6 | 13 | CH_fve_407 | 9 | 53 | 0.0000555857 |
Glycine max | Gm16 | 13 | CH_gma_730 | 7 | 26 | 0.000487369 |
Malus domestica | 9 | 13 | CH_mdo_120 | 8 | 24 | 0.000000103214 |
Malus domestica | 9 | 14 | CH_mdo_25 | 10 | 86 | 0.0000146115 |
Medicago truncatula | chr1 | 13 | CH_mtr_964 | 7 | 29 | 0.000165684 |
Medicago truncatula | chr6 | 14 | CH_mtr_108 | 16 | 76 | 0.00000000000011296 |
Populus trichocarpa | Chr13 | 13 | CH_ptr_365 | 7 | 12 | 0.000000514195 |
Prunus persica | scaffold_3 | 14 | CH_ppe_114 | 10 | 65 | 0.0000935444 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |