Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR002935
- Description
- O-methyltransferase, family 3
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00036 | 13 | CH_atr_114 | 4 | 7 | 0.000000000777444 |
Citrullus lanatus | Chr11 | 13 | CH_cla_50 | 5 | 6 | 0.0000000000000496009 |
Citrus sinensis | scaffold00069 | 13 | CH_csi_143 | 3 | 3 | 0.00000112676 |
Eucalyptus grandis | scaffold_3 | 13 | CH_egr_934 | 3 | 4 | 0.0000233408 |
Eucalyptus grandis | scaffold_3 | 13 | CH_egr_532 | 5 | 15 | 0.00000000405382 |
Eucalyptus grandis | scaffold_3 | 13 | CH_egr_1156 | 3 | 8 | 0.000326246 |
Eucalyptus grandis | scaffold_8 | 13 | CH_egr_434 | 5 | 8 | 0.0000000000758048 |
Fragaria vesca | LG5 | 13 | CH_fve_216 | 4 | 8 | 0.0000000450854 |
Fragaria vesca | scf0513146 | 13 | CH_fve_78 | 5 | 6 | 0.00000000000115805 |
Malus domestica | 16 | 13 | CH_mdo_350 | 3 | 12 | 0.000115845 |
Medicago truncatula | chr4 | 13 | CH_mtr_582 | 4 | 36 | 0.00000106852 |
Oryza sativa ssp. japonica | 8 | 13 | CH_osa_283 | 3 | 3 | 0.0000000381964 |
Ricinus communis | 30115 | 13 | CH_rco_188 | 3 | 3 | 0.00000081004 |
Solanum lycopersicum | ch02 | 13 | CH_sly_252 | 4 | 5 | 0.0000000579757 |
Solanum lycopersicum | ch05 | 13 | CH_sly_221 | 6 | 39 | 0.000000016878 |
Solanum lycopersicum | ch05 | 13 | CH_sly_36 | 11 | 44 | 2.44578e-21 |
Solanum lycopersicum | ch05 | 14 | CH_sly_13 | 18 | 196 | 6.13916e-30 |
Solanum lycopersicum | ch05 | 15 | CH_sly_6 | 3 | 6 | 0.0000162849 |
Solanum tuberosum | chr02 | 13 | CH_stu_186 | 5 | 5 | 0.000000000000344212 |
Solanum tuberosum | chr03 | 13 | CH_stu_558 | 3 | 3 | 0.00000272267 |
Vitis vinifera | chr11 | 13 | CH_vvi_167 | 4 | 4 | 0.000000000631848 |
Zea mays | 4 | 13 | CH_zma_524 | 2 | 2 | 0.000754375 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |