Functional clusters
Information
- Type
- InterPro domain
- Identifier
- IPR000209
- Description
- Peptidase S8/S53 domain
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00017 | 13 | CH_atr_6 | 20 | 29 | 1.2431e-39 |
Amborella trichopoda | scaffold00044 | 13 | CH_atr_127 | 6 | 9 | 0.00000000292008 |
Amborella trichopoda | scaffold00017 | 14 | CH_atr_6 | 20 | 29 | 1.2431e-39 |
Arabidopsis lyrata | scaffold_5 | 13 | CH_aly_504 | 3 | 3 | 0.000371911 |
Arabidopsis thaliana | 1 | 13 | CH_ath_138 | 5 | 6 | 0.00000000215491 |
Beta vulgaris | Bvchr7.sca021 | 13 | CH_bvu_154 | 4 | 4 | 0.0000000971466 |
Carica papaya | supercontig_18 | 13 | CH_cpa_135 | 4 | 5 | 0.0000022363 |
Citrus sinensis | scaffold00013 | 13 | CH_csi_85 | 5 | 6 | 0.0000000154096 |
Citrus sinensis | scaffold00026 | 13 | CH_csi_46 | 6 | 6 | 0.00000000000655955 |
Glycine max | Gm04 | 13 | CH_gma_220 | 5 | 5 | 0.00000000371923 |
Glycine max | Gm18 | 13 | CH_gma_623 | 4 | 9 | 0.000202384 |
Gossypium raimondii | Chr10 | 13 | CH_gra_165 | 5 | 5 | 0.000000000918146 |
Malus domestica | 10 | 13 | CH_mdo_225 | 6 | 35 | 0.0000042381 |
Malus domestica | 15 | 13 | CH_mdo_257 | 4 | 7 | 0.0000107719 |
Malus domestica | 2 | 13 | CH_mdo_487 | 3 | 3 | 0.000362948 |
Malus domestica | 7 | 13 | CH_mdo_166 | 4 | 4 | 0.000000720418 |
Oryza sativa ssp. japonica | 2 | 13 | CH_osa_246 | 6 | 23 | 0.00000000795837 |
Prunus persica | scaffold_5 | 13 | CH_ppe_40 | 11 | 14 | 5.75088e-23 |
Prunus persica | scaffold_5 | 14 | CH_ppe_37 | 11 | 14 | 5.75088e-23 |
Ricinus communis | 30115 | 13 | CH_rco_106 | 5 | 5 | 0.00000000415007 |
Ricinus communis | 30170 | 13 | CH_rco_201 | 4 | 4 | 0.00000148267 |
Ricinus communis | 30190 | 14 | CH_rco_12 | 11 | 35 | 5.37619e-16 |
Solanum lycopersicum | ch03 | 13 | CH_sly_766 | 3 | 3 | 0.000683466 |
Solanum lycopersicum | ch08 | 13 | CH_sly_6 | 17 | 18 | 3.45849e-39 |
Solanum lycopersicum | ch08 | 13 | CH_sly_63 | 9 | 11 | 1.0716e-17 |
Solanum lycopersicum | ch08 | 14 | CH_sly_65 | 10 | 188 | 0.00000385513 |
Solanum lycopersicum | ch08 | 14 | CH_sly_7 | 17 | 18 | 3.45849e-39 |
Solanum tuberosum | chr04 | 13 | CH_stu_585 | 4 | 4 | 0.00000470325 |
Solanum tuberosum | chr07 | 13 | CH_stu_545 | 5 | 9 | 0.00000195199 |
Solanum tuberosum | chr10 | 13 | CH_stu_258 | 6 | 6 | 0.0000000000517336 |
Thellungiella parvula | ch6-6 | 13 | CH_tpa_88 | 7 | 39 | 0.0000000387942 |
Theobroma cacao | scaffold_10r | 13 | CH_tca_47 | 8 | 9 | 6.55227e-17 |
Vitis vinifera | chr16 | 13 | CH_vvi_262 | 6 | 15 | 0.000000164672 |
Vitis vinifera | chr18 | 13 | CH_vvi_700 | 3 | 3 | 0.000996849 |
Vitis vinifera | chr6 | 13 | CH_vvi_357 | 4 | 4 | 0.0000032616 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |