Functional clusters
Information
- Type
- GO term
- Identifier
- GO:1901136
- Description
- carbohydrate derivative catabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 4 | 4 | CH_ath_17 | 10 | 20 | 0.0000000000414212 |
Arabidopsis thaliana | 2 | 5 | CH_ath_153 | 15 | 218 | 0.000817975 |
Arabidopsis thaliana | 4 | 5 | CH_ath_30 | 10 | 20 | 0.000000000134161 |
Arabidopsis thaliana | 2 | 6 | CH_ath_106 | 15 | 176 | 0.0000710134 |
Arabidopsis thaliana | 4 | 6 | CH_ath_35 | 10 | 20 | 0.00000000018944 |
Citrullus lanatus | Chr6 | 1 | CH_cla_101 | 4 | 4 | 0.0000119117 |
Eucalyptus grandis | scaffold_9 | 5 | CH_egr_225 | 14 | 271 | 0.0000105271 |
Eucalyptus grandis | scaffold_9 | 6 | CH_egr_265 | 14 | 271 | 0.0000257199 |
Fragaria vesca | LG1 | 6 | CH_fve_39 | 14 | 235 | 0.0000000717897 |
Medicago truncatula | chr4 | 5 | CH_mtr_101 | 10 | 114 | 0.0000000289075 |
Medicago truncatula | chr4 | 6 | CH_mtr_129 | 10 | 114 | 0.000000153637 |
Prunus persica | scaffold_7 | 5 | CH_ppe_72 | 11 | 119 | 0.000000270934 |
Prunus persica | scaffold_7 | 6 | CH_ppe_94 | 11 | 119 | 0.000000523945 |
Thellungiella parvula | ch4-6 | 5 | CH_tpa_13 | 13 | 152 | 0.000000369211 |
Thellungiella parvula | ch4-6 | 6 | CH_tpa_10 | 13 | 120 | 0.0000000358039 |
Theobroma cacao | scaffold_9 | 5 | CH_tca_38 | 10 | 70 | 0.0000000190296 |
Theobroma cacao | scaffold_9 | 6 | CH_tca_57 | 10 | 70 | 0.0000000347902 |
Vitis vinifera | chr11 | 6 | CH_vvi_83 | 10 | 62 | 0.00000013066 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0006032 | chitin catabolic process | 106 |
GO:0006148 | inosine catabolic process | 2 |
GO:0006154 | adenosine catabolic process | 18 |
GO:0006184 | GTP catabolic process | 6 |
GO:0006200 | ATP catabolic process | 7 |
GO:0006516 | glycoprotein catabolic process | 2 |
GO:0009972 | cytidine deamination | 15 |
GO:0019762 | glucosinolate catabolic process | 1 |
GO:0032312 | regulation of ARF GTPase activity | 3 |
GO:0032313 | regulation of Rab GTPase activity | 3 |
GO:0046477 | glycosylceramide catabolic process | 3 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |