PLAZA 3.0 Dicots : Functional Clustering

Functional clusters

No results found

GO term	Description	Number of clusters
GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	6
GO:0007094	mitotic spindle assembly checkpoint	6
GO:0007346	regulation of mitotic cell cycle	1
GO:0010564	regulation of cell cycle process	2
GO:0032877	positive regulation of DNA endoreduplication	2
GO:0045128	negative regulation of reciprocal meiotic recombination	4
GO:0045841	negative regulation of mitotic metaphase/anaphase transition	2
GO:0045931	positive regulation of mitotic cell cycle	4
GO:0051446	positive regulation of meiotic cell cycle	2
GO:0060154	cellular process regulating host cell cycle in response to virus	2
GO:0060236	regulation of mitotic spindle organization	2

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
1	GO	Primary GO data only.	2	30	80	0.001	X
2	GO	Primary and orthology projected GO data.	2	30	80	0.001	X
3	GO	All GO data.	2	30	80	0.001	X
4	GO	Primary GO data only.	10	150	300	0.001	X
5	GO	Primary and orthology projected GO data.	10	150	300	0.001	X
6	GO	All GO data.	10	150	300	0.001	X
7	GO	Primary GO data only.	2	30	80	0.001	V
8	GO	Primary and orthology projected GO data.	2	30	80	0.001	V
9	GO	All GO data.	2	30	80	0.001	V
10	GO	Primary GO data only.	10	150	300	0.001	V
11	GO	Primary and orthology projected GO data.	10	150	300	0.001	V
12	GO	All GO data.	10	150	300	0.001	V
13	InterPro	No filter applied.	2	30	80	0.001	X
14	InterPro	No filter applied.	10	150	300	0.001	X
15	InterPro	No filter applied.	2	30	80	0.001	V
16	InterPro	No filter applied.	10	150	300	0.001	V
17	MapMan	No filter applied.	2	30	80	0.001	X
18	MapMan	No filter applied.	10	150	300	0.001	X
19	MapMan	No filter applied.	2	30	80	0.001	V
20	MapMan	No filter applied.	10	150	300	0.001	V