Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0048364
- Description
- root development
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Oryza sativa ssp. japonica | 2 | 1 | CH_osa_133 | 3 | 3 | 0.0000000668437 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0010015 | root morphogenesis | 2 |
GO:0010053 | root epidermal cell differentiation | 2 |
GO:0010054 | trichoblast differentiation | 15 |
GO:0010071 | root meristem specification | 2 |
GO:0010082 | regulation of root meristem growth | 2 |
GO:0010311 | lateral root formation | 17 |
GO:0010479 | stele development | 2 |
GO:0048766 | root hair initiation | 4 |
GO:0048767 | root hair elongation | 8 |
GO:0048830 | adventitious root development | 10 |
GO:0080147 | root hair cell development | 2 |
GO:0080181 | lateral root branching | 11 |
GO:0090057 | root radial pattern formation | 4 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |