Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0048046
- Description
- apoplast
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Capsella rubella | scaffold_8 | 2 | CH_cru_13 | 13 | 13 | 9.12836e-20 |
Capsella rubella | scaffold_8 | 5 | CH_cru_9 | 13 | 13 | 9.12836e-20 |
Eucalyptus grandis | scaffold_6 | 2 | CH_egr_523 | 12 | 77 | 0.00000839765 |
Eucalyptus grandis | scaffold_6 | 2 | CH_egr_455 | 6 | 7 | 0.000000925155 |
Fragaria vesca | LG7 | 3 | CH_fve_382 | 4 | 4 | 0.000409688 |
Fragaria vesca | LG6 | 5 | CH_fve_40 | 16 | 212 | 0.00000716643 |
Fragaria vesca | LG6 | 6 | CH_fve_62 | 17 | 212 | 0.00000460233 |
Gossypium raimondii | Chr11 | 3 | CH_gra_221 | 5 | 5 | 0.0000236064 |
Malus domestica | 11 | 2 | CH_mdo_60 | 7 | 16 | 0.000000151285 |
Malus domestica | 11 | 3 | CH_mdo_96 | 7 | 16 | 0.000000304047 |
Manihot esculenta | scaffold03741 | 3 | CH_mes_91 | 10 | 35 | 0.000000752511 |
Manihot esculenta | scaffold03741 | 6 | CH_mes_16 | 10 | 35 | 0.000000752511 |
Populus trichocarpa | Chr10 | 3 | CH_ptr_346 | 5 | 5 | 0.0000231367 |
Populus trichocarpa | Chr16 | 5 | CH_ptr_94 | 11 | 62 | 0.0000191906 |
Populus trichocarpa | Chr16 | 6 | CH_ptr_121 | 11 | 62 | 0.0000470447 |
Prunus persica | scaffold_2 | 3 | CH_ppe_331 | 5 | 6 | 0.0000564935 |
Solanum tuberosum | chr05 | 3 | CH_stu_599 | 5 | 7 | 0.000162482 |
Theobroma cacao | scaffold_10r | 3 | CH_tca_424 | 4 | 4 | 0.000654186 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |