Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0046983
- Description
- protein dimerization activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00061 | 1 | CH_atr_66 | 6 | 6 | 0.000000014838 |
Amborella trichopoda | scaffold00159 | 1 | CH_atr_170 | 4 | 4 | 0.000180345 |
Amborella trichopoda | scaffold00061 | 2 | CH_atr_75 | 6 | 6 | 0.000000114659 |
Amborella trichopoda | scaffold00159 | 2 | CH_atr_231 | 4 | 4 | 0.000701383 |
Amborella trichopoda | scaffold00003 | 6 | CH_atr_50 | 10 | 32 | 0.000000471939 |
Arabidopsis lyrata | scaffold_2 | 3 | CH_aly_391 | 5 | 6 | 0.000826443 |
Arabidopsis lyrata | scaffold_2 | 9 | CH_aly_15 | 5 | 6 | 0.000372021 |
Arabidopsis thaliana | 5 | 1 | CH_ath_288 | 10 | 46 | 0.000253962 |
Arabidopsis thaliana | 5 | 2 | CH_ath_237 | 11 | 46 | 0.000018947 |
Arabidopsis thaliana | 5 | 3 | CH_ath_261 | 11 | 46 | 0.0000359208 |
Arabidopsis thaliana | 5 | 5 | CH_ath_74 | 11 | 46 | 0.000018947 |
Arabidopsis thaliana | 5 | 6 | CH_ath_88 | 11 | 46 | 0.0000359208 |
Beta vulgaris | Bvchr6.sca028 | 1 | CH_bvu_195 | 6 | 13 | 0.000436774 |
Beta vulgaris | Bvchr1.sca001 | 4 | CH_bvu_24 | 10 | 40 | 0.00000831881 |
Beta vulgaris | Bvchr1.sca001 | 5 | CH_bvu_30 | 10 | 40 | 0.0000391884 |
Beta vulgaris | Bvchr1.sca001 | 6 | CH_bvu_47 | 10 | 40 | 0.000107555 |
Capsella rubella | scaffold_2 | 1 | CH_cru_42 | 9 | 10 | 0.000000000181367 |
Capsella rubella | scaffold_4 | 1 | CH_cru_155 | 6 | 8 | 0.0000570056 |
Capsella rubella | scaffold_2 | 2 | CH_cru_79 | 9 | 10 | 0.00000000101778 |
Capsella rubella | scaffold_4 | 2 | CH_cru_248 | 6 | 8 | 0.000178604 |
Capsella rubella | scaffold_2 | 3 | CH_cru_54 | 10 | 10 | 0.00000000000475243 |
Capsella rubella | scaffold_4 | 3 | CH_cru_317 | 6 | 8 | 0.000255777 |
Capsella rubella | scaffold_2 | 4 | CH_cru_18 | 11 | 20 | 0.00000000110167 |
Capsella rubella | scaffold_2 | 5 | CH_cru_30 | 11 | 20 | 0.00000000881571 |
Capsella rubella | scaffold_2 | 6 | CH_cru_24 | 10 | 10 | 0.00000000000475243 |
Carica papaya | supercontig_173 | 1 | CH_cpa_158 | 6 | 14 | 0.000424188 |
Carica papaya | supercontig_34 | 3 | CH_cpa_297 | 5 | 6 | 0.000428102 |
Citrullus lanatus | Chr1 | 1 | CH_cla_195 | 8 | 38 | 0.000682009 |
Cucumis melo | CM3.5_scaffold00007 | 1 | CH_cme_204 | 8 | 43 | 0.000946236 |
Cucumis melo | CM3.5_scaffold00021 | 1 | CH_cme_140 | 8 | 33 | 0.000100467 |
Cucumis melo | CM3.5_scaffold00021 | 2 | CH_cme_169 | 9 | 37 | 0.000131977 |
Cucumis melo | CM3.5_scaffold00021 | 6 | CH_cme_42 | 10 | 37 | 0.0000141727 |
Eucalyptus grandis | scaffold_11 | 1 | CH_egr_49 | 15 | 18 | 1.57938e-21 |
Eucalyptus grandis | scaffold_5 | 1 | CH_egr_298 | 7 | 9 | 0.0000000856209 |
Eucalyptus grandis | scaffold_8 | 1 | CH_egr_182 | 9 | 11 | 0.0000000000224516 |
Eucalyptus grandis | scaffold_11 | 2 | CH_egr_82 | 15 | 18 | 7.27095e-20 |
Eucalyptus grandis | scaffold_5 | 2 | CH_egr_441 | 7 | 9 | 0.000000503323 |
Eucalyptus grandis | scaffold_8 | 2 | CH_egr_270 | 9 | 11 | 0.000000000220298 |
Eucalyptus grandis | scaffold_5 | 3 | CH_egr_518 | 7 | 9 | 0.000000932152 |
Eucalyptus grandis | scaffold_6 | 3 | CH_egr_741 | 9 | 32 | 0.000174864 |
Eucalyptus grandis | scaffold_8 | 3 | CH_egr_332 | 9 | 11 | 0.00000000048753 |
Eucalyptus grandis | scaffold_11 | 4 | CH_egr_47 | 15 | 18 | 1.57938e-21 |
Eucalyptus grandis | scaffold_5 | 4 | CH_egr_228 | 11 | 78 | 0.000247751 |
Eucalyptus grandis | scaffold_8 | 4 | CH_egr_129 | 10 | 19 | 0.000000000452951 |
Eucalyptus grandis | scaffold_11 | 5 | CH_egr_64 | 15 | 18 | 7.27095e-20 |
Eucalyptus grandis | scaffold_8 | 5 | CH_egr_154 | 10 | 19 | 0.00000000560648 |
Eucalyptus grandis | scaffold_8 | 6 | CH_egr_193 | 10 | 19 | 0.0000000134286 |
Fragaria vesca | LG4 | 1 | CH_fve_147 | 5 | 5 | 0.0000182345 |
Fragaria vesca | LG4 | 2 | CH_fve_185 | 5 | 5 | 0.0000505095 |
Fragaria vesca | LG4 | 3 | CH_fve_297 | 5 | 5 | 0.000119437 |
Glycine max | Gm10 | 1 | CH_gma_60 | 10 | 12 | 0.000000000126932 |
Glycine max | Gm10 | 2 | CH_gma_87 | 10 | 12 | 0.000000000657906 |
Glycine max | Gm10 | 3 | CH_gma_120 | 10 | 12 | 0.00000000187447 |
Glycine max | Gm18 | 3 | CH_gma_448 | 7 | 11 | 0.00033826 |
Glycine max | Gm10 | 4 | CH_gma_29 | 10 | 12 | 0.000000000126932 |
Glycine max | Gm10 | 5 | CH_gma_35 | 10 | 12 | 0.000000000657906 |
Glycine max | Gm10 | 6 | CH_gma_53 | 10 | 12 | 0.00000000187447 |
Gossypium raimondii | Chr10 | 1 | CH_gra_48 | 11 | 12 | 0.000000000000307723 |
Gossypium raimondii | Chr12 | 1 | CH_gra_257 | 6 | 9 | 0.000377598 |
Gossypium raimondii | Chr10 | 2 | CH_gra_54 | 11 | 12 | 0.00000000000221789 |
Gossypium raimondii | Chr05 | 3 | CH_gra_112 | 11 | 16 | 0.00000000209728 |
Gossypium raimondii | Chr10 | 3 | CH_gra_54 | 12 | 12 | 0.0000000000000161465 |
Gossypium raimondii | Chr10 | 4 | CH_gra_33 | 11 | 12 | 0.000000000000307723 |
Gossypium raimondii | Chr10 | 5 | CH_gra_35 | 11 | 12 | 0.00000000000221789 |
Gossypium raimondii | Chr10 | 6 | CH_gra_38 | 12 | 12 | 0.0000000000000161465 |
Lotus japonicus | chr2 | 1 | CH_lja_82 | 5 | 9 | 0.000132657 |
Lotus japonicus | chr2 | 2 | CH_lja_153 | 5 | 9 | 0.000504862 |
Lotus japonicus | chr2 | 3 | CH_lja_212 | 5 | 9 | 0.000847611 |
Malus domestica | 1 | 1 | CH_mdo_191 | 7 | 26 | 0.0002854 |
Medicago truncatula | chr2 | 1 | CH_mtr_313 | 6 | 9 | 0.00000313913 |
Medicago truncatula | chr3 | 1 | CH_mtr_525 | 5 | 9 | 0.000513139 |
Medicago truncatula | chr2 | 2 | CH_mtr_275 | 7 | 10 | 0.000000162975 |
Medicago truncatula | chr2 | 3 | CH_mtr_271 | 9 | 16 | 0.0000000108319 |
Medicago truncatula | chr4 | 4 | CH_mtr_199 | 11 | 119 | 0.000922894 |
Medicago truncatula | chr2 | 6 | CH_mtr_238 | 10 | 55 | 0.000234049 |
Populus trichocarpa | Chr16 | 3 | CH_ptr_130 | 12 | 20 | 0.0000000000842694 |
Populus trichocarpa | Chr16 | 6 | CH_ptr_72 | 12 | 20 | 0.0000000000842694 |
Prunus persica | scaffold_5 | 1 | CH_ppe_259 | 5 | 5 | 0.0000865054 |
Prunus persica | scaffold_5 | 2 | CH_ppe_321 | 5 | 5 | 0.000209786 |
Prunus persica | scaffold_1 | 3 | CH_ppe_483 | 5 | 5 | 0.000481116 |
Ricinus communis | 29646 | 1 | CH_rco_94 | 6 | 7 | 0.000000826767 |
Ricinus communis | 29646 | 2 | CH_rco_118 | 6 | 7 | 0.00000397355 |
Solanum tuberosum | chr01 | 1 | CH_stu_211 | 8 | 11 | 0.000000063371 |
Solanum tuberosum | chr04 | 1 | CH_stu_78 | 18 | 52 | 0.0000000000000315881 |
Solanum tuberosum | chr09 | 1 | CH_stu_460 | 5 | 6 | 0.000407015 |
Solanum tuberosum | chr12 | 1 | CH_stu_254 | 7 | 9 | 0.000000781261 |
Solanum tuberosum | chr01 | 2 | CH_stu_250 | 8 | 11 | 0.000000272365 |
Solanum tuberosum | chr04 | 2 | CH_stu_114 | 18 | 52 | 0.000000000000780887 |
Solanum tuberosum | chr12 | 2 | CH_stu_297 | 7 | 9 | 0.0000028018 |
Solanum tuberosum | chr01 | 3 | CH_stu_407 | 8 | 11 | 0.00000156179 |
Solanum tuberosum | chr04 | 3 | CH_stu_195 | 18 | 52 | 0.0000000000352467 |
Solanum tuberosum | chr12 | 3 | CH_stu_481 | 7 | 9 | 0.0000129447 |
Solanum tuberosum | chr12 | 3 | CH_stu_356 | 10 | 18 | 0.000000265346 |
Solanum tuberosum | chr04 | 4 | CH_stu_57 | 18 | 52 | 0.0000000000000315881 |
Solanum tuberosum | chr04 | 5 | CH_stu_65 | 18 | 52 | 0.000000000000780887 |
Solanum tuberosum | chr02 | 6 | CH_stu_149 | 10 | 21 | 0.00000198578 |
Solanum tuberosum | chr04 | 6 | CH_stu_100 | 18 | 52 | 0.0000000000352467 |
Solanum tuberosum | chr12 | 6 | CH_stu_138 | 10 | 18 | 0.000000265346 |
Vitis vinifera | chr3 | 1 | CH_vvi_272 | 5 | 8 | 0.000424975 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0042803 | protein homodimerization activity | 2 |
GO:0046982 | protein heterodimerization activity | 20 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |