Functional clusters   top

Information

Type
GO term
Identifier
GO:0046914
Description
transition metal ion binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold000496CH_atr_6110140.0000155352
Amborella trichopodascaffold000896CH_atr_7810170.000254218
Arabidopsis lyratascaffold_63CH_aly_22612190.0000323315
Arabidopsis lyratascaffold_66CH_aly_6312190.0000323315
Arabidopsis thaliana41CH_ath_11114230.00000011822
Arabidopsis thaliana42CH_ath_14614230.000000186483
Arabidopsis thaliana43CH_ath_12315230.000000018784
Arabidopsis thaliana44CH_ath_2914230.00000011822
Arabidopsis thaliana54CH_ath_10410170.000254249
Arabidopsis thaliana45CH_ath_4214230.000000186483
Arabidopsis thaliana55CH_ath_13410170.000351704
Arabidopsis thaliana46CH_ath_4515230.000000018784
Arabidopsis thaliana56CH_ath_15510170.000657074
Beta vulgarisBvchr8.sca0174CH_bvu_2813280.000142757
Beta vulgarisBvchr8.sca0175CH_bvu_4213280.000377409
Beta vulgarisBvchr8.sca0176CH_bvu_5613280.000907839
Capsella rubellascaffold_64CH_cru_3910160.000238026
Capsella rubellascaffold_65CH_cru_6911170.000102791
Capsella rubellascaffold_66CH_cru_9611170.000259468
Citrullus lanatusChr11CH_cla_6316340.0000000513316
Citrullus lanatusChr31CH_cla_21711270.000968477
Citrullus lanatusChr12CH_cla_8219490.000000375284
Citrullus lanatusChr13CH_cla_12916340.00000245991
Citrullus lanatusChr33CH_cla_13213220.00000341
Citrullus lanatusChr14CH_cla_2116340.0000000513316
Citrullus lanatusChr34CH_cla_3611270.000968477
Citrullus lanatusChr15CH_cla_2419490.000000375284
Citrullus lanatusChr16CH_cla_3816340.00000245991
Citrullus lanatusChr36CH_cla_3913220.00000341
Cucumis meloCM3.5_scaffold000074CH_cme_2810160.00000632753
Cucumis meloCM3.5_scaffold000164CH_cme_2010110.0000000107309
Cucumis meloCM3.5_scaffold000075CH_cme_3310160.000024843
Cucumis meloCM3.5_scaffold000165CH_cme_1910110.0000000435323
Cucumis meloCM3.5_scaffold000056CH_cme_66412640.000837795
Cucumis meloCM3.5_scaffold000076CH_cme_4310140.000014228
Cucumis meloCM3.5_scaffold000076CH_cme_5210160.000101658
Cucumis meloCM3.5_scaffold000166CH_cme_3310110.000000185281
Eucalyptus grandisscaffold_31CH_egr_57320750.000350258
Eucalyptus grandisscaffold_32CH_egr_74521750.000387147
Eucalyptus grandisscaffold_33CH_egr_82422750.000392702
Eucalyptus grandisscaffold_14CH_egr_16712170.000000320222
Eucalyptus grandisscaffold_34CH_egr_23620750.000350258
Eucalyptus grandisscaffold_74CH_egr_15814230.00000011845
Eucalyptus grandisscaffold_35CH_egr_27421750.000387147
Eucalyptus grandisscaffold_75CH_egr_19314230.000000510272
Fragaria vescaLG63CH_fve_385770.000428799
Glycine maxGm183CH_gma_27618390.00000509426
Glycine maxGm194CH_gma_4710120.00000212178
Glycine maxGm195CH_gma_5710120.00000580082
Glycine maxGm186CH_gma_6918390.00000509426
Glycine maxGm196CH_gma_7810120.0000201514
Gossypium raimondiiChr014CH_gra_8010170.000657553
Malus domestica84CH_mdo_3710250.000463489
Malus domestica15CH_mdo_15251200.00000106957
Medicago truncatulachr41CH_mtr_36114490.0000179186
Medicago truncatulachr13CH_mtr_83917720.000694663
Medicago truncatulachr74CH_mtr_13911250.00000691078
Medicago truncatulachr74CH_mtr_16510230.0000574103
Medicago truncatulachr75CH_mtr_18510230.00014284
Medicago truncatulachr75CH_mtr_213302510.00045302
Medicago truncatulachr46CH_mtr_20915490.000103116
Medicago truncatulachr46CH_mtr_17314350.00000599584
Medicago truncatulachr76CH_mtr_20211230.0000614009
Oryza sativa ssp. japonica47CH_osa_3418490.000141104
Oryza sativa ssp. japonica48CH_osa_3918490.000310144
Oryza sativa ssp. japonica49CH_osa_5318490.000697345
Populus trichocarpaChr015CH_ptr_11314330.000322758
Prunus persicascaffold_51CH_ppe_31419590.000637669
Prunus persicascaffold_54CH_ppe_11824900.000622959
Ricinus communis301902CH_rco_1789120.000156858
Ricinus communis298043CH_rco_267770.000403501
Ricinus communis301476CH_rco_3610110.00000204073
Theobroma cacaoscaffold_21CH_tca_28117550.000470299
Theobroma cacaoscaffold_23CH_tca_42519550.000673075
Theobroma cacaoscaffold_24CH_tca_7717550.000470299
Theobroma cacaoscaffold_26CH_tca_12619550.000673075
Vitis viniferachr74CH_vvi_60381890.000000090332
Zea mays14CH_zma_1910110.0000000243071

Available child term results

GO term Description Number of clusters
GO:0005506iron ion binding600
GO:0005507copper ion binding113
GO:0008198ferrous iron binding24
GO:0008199ferric iron binding2
GO:0008270zinc ion binding175
GO:0016151nickel cation binding10
GO:0016531copper chaperone activity1
GO:0030145manganese ion binding274
GO:0030151molybdenum ion binding9

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V