Functional clusters   top

Information

Type
GO term
Identifier
GO:0046274
Description
lignin catabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgarisBvchr2.sca0011CH_bvu_122330.0000135535
Beta vulgarisBvchr7.sca0211CH_bvu_64450.0000000523226
Citrus sinensisscaffold000831CH_csi_114360.000146243
Citrus sinensisscaffold000832CH_csi_145360.000146243
Citrus sinensisscaffold000143CH_csi_90470.000000973902
Citrus sinensisscaffold000833CH_csi_229360.000533862
Fragaria vescaLG21CH_fve_447370.000000000304766
Glycine maxGm071CH_gma_235330.0000378345
Glycine maxGm181CH_gma_140460.000000482314
Gossypium raimondiiChr031CH_gra_233340.000226654
Oryza sativa ssp. japonica11CH_osa_1236710.0000000323595
Oryza sativa ssp. japonica51CH_osa_227340.0000175649
Prunus persicascaffold_81CH_ppe_269263.19965e-17
Ricinus communis297031CH_rco_90480.000000607117
Solanum tuberosumchr091CH_stu_502390.000824241
Theobroma cacaoscaffold_51CH_tca_117470.000000242975
Theobroma cacaoscaffold_81CH_tca_210340.00004292
Vitis viniferachr81CH_vvi_185490.00000742384
Vitis viniferachr186CH_vvi_44172021.25364e-17
Zea mays31CH_zma_635410.000000220317

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V