Functional clusters   top

Information

Type
GO term
Identifier
GO:0043412
Description
macromolecule modification

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana53CH_ath_46425740.000956711
Beta vulgarisBvchr9.sca0253CH_bvu_30417510.000327459
Beta vulgarisBvchr9.sca0256CH_bvu_4917510.000327459
Carica papayasupercontig_271CH_cpa_2910110.00000000777706
Carica papayasupercontig_272CH_cpa_3910110.000000046773
Carica papayasupercontig_274CH_cpa_1110110.00000000777706
Carica papayasupercontig_275CH_cpa_1010110.000000046773
Fragaria vescaLG71CH_fve_160780.0000386543
Fragaria vescaLG72CH_fve_227780.000131117
Solanum tuberosumchr059CH_stu_248120.000426745
Vitis viniferachr121CH_vvi_21413320.0000543739
Vitis viniferachr122CH_vvi_23914330.0000531263
Vitis viniferachr123CH_vvi_19517330.000000395581
Vitis viniferachr124CH_vvi_8513320.0000543739
Vitis viniferachr125CH_vvi_8614330.0000531263

Available child term results

GO term Description Number of clusters
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity6
GO:0000154rRNA modification42
GO:0001510RNA methylation1
GO:0002098tRNA wobble uridine modification1
GO:0006306DNA methylation5
GO:0006464cellular protein modification process69
GO:0006468protein phosphorylation374
GO:0006470protein dephosphorylation3
GO:0006471protein ADP-ribosylation9
GO:0006486protein glycosylation5
GO:0006499N-terminal protein myristoylation4
GO:0006517protein deglycosylation14
GO:0008213protein alkylation1
GO:0008612peptidyl-lysine modification to hypusine3
GO:0008616queuosine biosynthetic process8
GO:0010424DNA methylation on cytosine within a CG sequence4
GO:0010452histone H3-K36 methylation2
GO:0010731protein glutathionylation16
GO:0016255attachment of GPI anchor to protein38
GO:0016556mRNA modification2
GO:0016567protein ubiquitination32
GO:0016572histone phosphorylation3
GO:0016575histone deacetylation1
GO:0016579protein deubiquitination1
GO:0016598protein arginylation3
GO:0017182peptidyl-diphthamide metabolic process3
GO:0017186peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase2
GO:0018023peptidyl-lysine trimethylation3
GO:0018149peptide cross-linking25
GO:0018279protein N-linked glycosylation via asparagine2
GO:0018282metal incorporation into metallo-sulfur cluster2
GO:0018298protein-chromophore linkage5
GO:0018343protein farnesylation6
GO:0031167rRNA methylation5
GO:0031365N-terminal protein amino acid modification6
GO:0034227tRNA thio-modification4
GO:0034968histone lysine methylation1
GO:0035067negative regulation of histone acetylation8
GO:0035335peptidyl-tyrosine dephosphorylation2
GO:0043967histone H4 acetylation6
GO:0043968histone H2A acetylation4
GO:0044030regulation of DNA methylation11
GO:0045116protein neddylation4
GO:0051444negative regulation of ubiquitin-protein ligase activity4
GO:0070526threonylcarbamoyladenosine biosynthetic process2
GO:0070647protein modification by small protein conjugation or removal1
GO:0070734histone H3-K27 methylation4
GO:0070932histone H3 deacetylation1
GO:0071900regulation of protein serine/threonine kinase activity2
GO:0080156mitochondrial mRNA modification2
GO:0090042tubulin deacetylation2
GO:1900865chloroplast RNA modification1

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V