Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0035556
- Description
- intracellular signal transduction
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Capsella rubella | scaffold_6 | 3 | CH_cru_122 | 7 | 10 | 0.0000000377582 |
Capsella rubella | scaffold_6 | 6 | CH_cru_52 | 10 | 44 | 0.000000607139 |
Medicago truncatula | chr5 | 1 | CH_mtr_494 | 6 | 60 | 0.00033574 |
Medicago truncatula | chr5 | 3 | CH_mtr_497 | 4 | 4 | 0.0000124815 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0007264 | small GTPase mediated signal transduction | 6 |
GO:0019722 | calcium-mediated signaling | 4 |
GO:0031929 | TOR signaling | 22 |
GO:0032011 | ARF protein signal transduction | 2 |
GO:0032312 | regulation of ARF GTPase activity | 3 |
GO:0032313 | regulation of Rab GTPase activity | 3 |
GO:0048015 | phosphatidylinositol-mediated signaling | 12 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |