Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0032555
- Description
- purine ribonucleotide binding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_2 | 6 | CH_aly_90 | 59 | 288 | 0.000370229 |
Eucalyptus grandis | scaffold_11 | 1 | CH_egr_245 | 30 | 56 | 0.00000000322274 |
Eucalyptus grandis | scaffold_11 | 2 | CH_egr_326 | 30 | 56 | 0.00000000479854 |
Eucalyptus grandis | scaffold_11 | 3 | CH_egr_333 | 29 | 44 | 0.000000000518058 |
Eucalyptus grandis | scaffold_11 | 4 | CH_egr_131 | 31 | 57 | 0.000000000716493 |
Eucalyptus grandis | scaffold_11 | 5 | CH_egr_147 | 31 | 57 | 0.00000000108295 |
Eucalyptus grandis | scaffold_11 | 6 | CH_egr_140 | 36 | 57 | 0.00000000000268307 |
Malus domestica | 2 | 4 | CH_mdo_23 | 50 | 284 | 0.00000748807 |
Malus domestica | 2 | 5 | CH_mdo_24 | 50 | 284 | 0.0000120906 |
Medicago truncatula | chr8 | 1 | CH_mtr_273 | 22 | 68 | 0.000000766326 |
Medicago truncatula | chr8 | 2 | CH_mtr_337 | 22 | 68 | 0.00000126296 |
Medicago truncatula | chr8 | 3 | CH_mtr_201 | 29 | 69 | 0.000000000468873 |
Medicago truncatula | chr8 | 4 | CH_mtr_88 | 53 | 279 | 0.00000000249133 |
Medicago truncatula | chr8 | 6 | CH_mtr_224 | 55 | 300 | 0.000168655 |
Prunus persica | scaffold_2 | 3 | CH_ppe_235 | 30 | 73 | 0.00000104192 |
Prunus persica | scaffold_2 | 6 | CH_ppe_101 | 30 | 73 | 0.00000104192 |
Solanum lycopersicum | ch04 | 1 | CH_sly_252 | 15 | 28 | 0.000027053 |
Solanum lycopersicum | ch04 | 2 | CH_sly_283 | 15 | 28 | 0.000033071 |
Solanum lycopersicum | ch04 | 3 | CH_sly_567 | 15 | 28 | 0.000462028 |
Solanum lycopersicum | ch11 | 3 | CH_sly_387 | 20 | 43 | 0.0000454159 |
Solanum tuberosum | chr04 | 1 | CH_stu_163 | 26 | 50 | 0.000000000989217 |
Solanum tuberosum | chr11 | 1 | CH_stu_419 | 18 | 40 | 0.000186014 |
Solanum tuberosum | chr04 | 2 | CH_stu_180 | 26 | 50 | 0.00000000148891 |
Solanum tuberosum | chr08 | 2 | CH_stu_335 | 21 | 46 | 0.00000976564 |
Solanum tuberosum | chr11 | 2 | CH_stu_489 | 18 | 40 | 0.000244675 |
Solanum tuberosum | chr01 | 3 | CH_stu_311 | 21 | 31 | 0.0000000308073 |
Solanum tuberosum | chr04 | 3 | CH_stu_133 | 29 | 41 | 0.000000000000205123 |
Solanum tuberosum | chr11 | 3 | CH_stu_435 | 22 | 40 | 0.0000035634 |
Solanum tuberosum | chr08 | 5 | CH_stu_125 | 21 | 46 | 0.00000976564 |
Solanum tuberosum | chr01 | 6 | CH_stu_125 | 21 | 31 | 0.0000000308073 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0005524 | ATP binding | 54 |
GO:0005525 | GTP binding | 29 |
GO:0016208 | AMP binding | 3 |
GO:0030553 | cGMP binding | 3 |
GO:0032559 | adenyl ribonucleotide binding | 76 |
GO:0043531 | ADP binding | 1129 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |