Functional clusters   top

Information

Type
GO term
Identifier
GO:0031224
Description
intrinsic to membrane

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Eucalyptus grandisscaffold_72CH_egr_74212390.000359678
Eucalyptus grandisscaffold_73CH_egr_79513410.00028203
Eucalyptus grandisscaffold_74CH_egr_252272550.000929368
Eucalyptus grandisscaffold_94CH_egr_251181180.00075593
Eucalyptus grandisscaffold_75CH_egr_27212390.000359678
Glycine maxGm161CH_gma_30611300.000330823
Medicago truncatulachr13CH_mtr_78012540.000420641
Medicago truncatulachr16CH_mtr_25712540.000420641
Oryza sativa ssp. japonica72CH_osa_41213690.000776833
Oryza sativa ssp. japonica75CH_osa_15415880.000257402
Oryza sativa ssp. japonica76CH_osa_14816880.000101261
Prunus persicascaffold_83CH_ppe_52918790.000869563
Prunus persicascaffold_86CH_ppe_108251110.00000249836
Thellungiella parvulach3-15CH_tpa_3410250.000864075

Available child term results

GO term Description Number of clusters
GO:0005643nuclear pore21
GO:0005779integral to peroxisomal membrane5
GO:0008076voltage-gated potassium channel complex3
GO:0016021integral to membrane57
GO:0030173integral to Golgi membrane12
GO:0031225anchored to membrane36
GO:0031227intrinsic to endoplasmic reticulum membrane5
GO:0031305integral to mitochondrial inner membrane1
GO:0031307integral to mitochondrial outer membrane1
GO:0031357integral to chloroplast inner membrane4
GO:0034707chloride channel complex1
GO:0042765GPI-anchor transamidase complex2
GO:0071458integral to cytosolic side of endoplasmic reticulum membrane2
GO:0072546ER membrane protein complex17

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V