Functional clusters   top

Information

Type
GO term
Identifier
GO:0031047
Description
gene silencing by RNA

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold000123CH_atr_228490.0000679774
Beta vulgarisBvchr5.sca0241CH_bvu_129330.0000215402
Beta vulgarisBvchr2.sca0013CH_bvu_89560.0000000213255
Fragaria vescascf05131783CH_fve_248130.00000000000000637996
Gossypium raimondiiChr113CH_gra_1636280.000000778613
Manihot esculentascaffold094923CH_mes_198330.000191753
Medicago truncatulachr23CH_mtr_661330.000129716
Medicago truncatulachr33CH_mtr_492480.0000110992
Populus trichocarpaChr031CH_ptr_46678.95723e-16
Populus trichocarpaChr033CH_ptr_66770.00000000000000216305
Prunus persicascaffold_63CH_ppe_387330.000152775
Thellungiella parvulach5-33CH_tpa_1015150.00000369633

Available child term results

GO term Description Number of clusters
GO:0016246RNA interference2
GO:0031054pre-miRNA processing2
GO:0035196production of miRNAs involved in gene silencing by miRNA2
GO:0035278negative regulation of translation involved in gene silencing by miRNA18
GO:0035279mRNA cleavage involved in gene silencing by miRNA6

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V