Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0030154
- Description
- cell differentiation
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Malus domestica | 2 | 1 | CH_mdo_59 | 3 | 9 | 0.000000268425 |
Solanum lycopersicum | ch03 | 1 | CH_sly_380 | 2 | 2 | 0.000344244 |
Solanum tuberosum | chr03 | 1 | CH_stu_361 | 2 | 2 | 0.0000569314 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0009860 | pollen tube growth | 6 |
GO:0010026 | trichome differentiation | 1 |
GO:0010053 | root epidermal cell differentiation | 2 |
GO:0010054 | trichoblast differentiation | 15 |
GO:0010090 | trichome morphogenesis | 2 |
GO:0010197 | polar nucleus fusion | 7 |
GO:0010442 | guard cell morphogenesis | 5 |
GO:0010455 | positive regulation of cell fate commitment | 2 |
GO:0022619 | generative cell differentiation | 1 |
GO:0031129 | inductive cell-cell signaling | 2 |
GO:0045165 | cell fate commitment | 2 |
GO:0045168 | cell-cell signaling involved in cell fate commitment | 12 |
GO:0045604 | regulation of epidermal cell differentiation | 2 |
GO:0048235 | pollen sperm cell differentiation | 14 |
GO:0048240 | sperm capacitation | 7 |
GO:0048497 | maintenance of floral organ identity | 5 |
GO:0048505 | regulation of timing of cell differentiation | 2 |
GO:0048588 | developmental cell growth | 2 |
GO:0048657 | anther wall tapetum cell differentiation | 2 |
GO:0048766 | root hair initiation | 4 |
GO:0048767 | root hair elongation | 8 |
GO:0080092 | regulation of pollen tube growth | 8 |
GO:0080147 | root hair cell development | 2 |
GO:1900033 | negative regulation of trichome patterning | 1 |
GO:2000036 | regulation of stem cell maintenance | 1 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |