Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0030117
- Description
- membrane coat
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Carica papaya | supercontig_180 | 1 | CH_cpa_126 | 3 | 3 | 0.000150714 |
Carica papaya | supercontig_180 | 2 | CH_cpa_151 | 3 | 3 | 0.000150714 |
Eucalyptus grandis | scaffold_5 | 1 | CH_egr_449 | 5 | 27 | 0.0000217251 |
Eucalyptus grandis | scaffold_5 | 2 | CH_egr_548 | 5 | 27 | 0.0000217251 |
Eucalyptus grandis | scaffold_5 | 3 | CH_egr_683 | 5 | 27 | 0.0000609993 |
Malus domestica | 10 | 1 | CH_mdo_65 | 5 | 12 | 0.000000323498 |
Malus domestica | 14 | 1 | CH_mdo_152 | 5 | 34 | 0.000110515 |
Malus domestica | 10 | 2 | CH_mdo_68 | 5 | 12 | 0.000000323498 |
Malus domestica | 14 | 2 | CH_mdo_175 | 5 | 34 | 0.000110515 |
Malus domestica | 10 | 3 | CH_mdo_128 | 5 | 12 | 0.0000017163 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0030123 | AP-3 adaptor complex | 2 |
GO:0030126 | COPI vesicle coat | 11 |
GO:0030127 | COPII vesicle coat | 2 |
GO:0030130 | clathrin coat of trans-Golgi network vesicle | 1 |
GO:0030131 | clathrin adaptor complex | 4 |
GO:0044599 | AP-5 adaptor complex | 15 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |