Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0019509
- Description
- L-methionine salvage from methylthioadenosine
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Beta vulgaris | Bvchr3_un.sca005 | 1 | CH_bvu_84 | 3 | 3 | 0.000000279742 |
Beta vulgaris | Bvchr3_un.sca005 | 2 | CH_bvu_103 | 3 | 3 | 0.000000489549 |
Beta vulgaris | Bvchr3_un.sca005 | 3 | CH_bvu_128 | 3 | 3 | 0.000000489549 |
Beta vulgaris | Bvchr3_un.sca005 | 7 | CH_bvu_1 | 3 | 3 | 0.0000000661995 |
Beta vulgaris | Bvchr3_un.sca005 | 8 | CH_bvu_1 | 3 | 3 | 0.000000165499 |
Beta vulgaris | Bvchr3_un.sca005 | 9 | CH_bvu_1 | 3 | 3 | 0.000000165499 |
Carica papaya | supercontig_44 | 1 | CH_cpa_40 | 3 | 3 | 0.000000141383 |
Carica papaya | supercontig_44 | 2 | CH_cpa_53 | 3 | 3 | 0.000000494839 |
Carica papaya | supercontig_44 | 3 | CH_cpa_89 | 3 | 3 | 0.000000494839 |
Malus domestica | 9 | 1 | CH_mdo_209 | 2 | 2 | 0.000461585 |
Malus domestica | 9 | 2 | CH_mdo_304 | 2 | 2 | 0.000969328 |
Ricinus communis | 29844 | 1 | CH_rco_77 | 3 | 4 | 0.00000023142 |
Ricinus communis | 29844 | 2 | CH_rco_94 | 3 | 4 | 0.000000578529 |
Ricinus communis | 29844 | 3 | CH_rco_126 | 3 | 4 | 0.000000578529 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |