Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0019318
- Description
- hexose metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Eucalyptus grandis | scaffold_10 | 6 | CH_egr_299 | 10 | 193 | 0.00028483 |
Lotus japonicus | chr1 | 6 | CH_lja_15 | 10 | 187 | 0.00000465008 |
Solanum tuberosum | chr02 | 1 | CH_stu_135 | 6 | 6 | 0.0000000000695831 |
Solanum tuberosum | chr02 | 2 | CH_stu_153 | 6 | 6 | 0.000000000101114 |
Solanum tuberosum | chr02 | 3 | CH_stu_221 | 6 | 6 | 0.00000000020041 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0006006 | glucose metabolic process | 3 |
GO:0006013 | mannose metabolic process | 24 |
GO:0006096 | glycolysis | 6 |
GO:0006110 | regulation of glycolysis | 2 |
GO:0009051 | pentose-phosphate shunt, oxidative branch | 2 |
GO:0009052 | pentose-phosphate shunt, non-oxidative branch | 3 |
GO:0019307 | mannose biosynthetic process | 5 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |