Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0016811
- Description
- hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Citrullus lanatus | Chr3 | 2 | CH_cla_135 | 3 | 3 | 0.0000650279 |
Cucumis melo | CM3.5_scaffold00025 | 2 | CH_cme_134 | 3 | 3 | 0.0000479546 |
Theobroma cacao | scaffold_1 | 3 | CH_tca_381 | 3 | 4 | 0.000319786 |
Vitis vinifera | chr7 | 1 | CH_vvi_205 | 3 | 4 | 0.0000276832 |
Vitis vinifera | chr7 | 2 | CH_vvi_275 | 3 | 4 | 0.000185019 |
Vitis vinifera | chr7 | 3 | CH_vvi_405 | 3 | 4 | 0.000309861 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0000224 | peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity | 14 |
GO:0003837 | beta-ureidopropionase activity | 2 |
GO:0004040 | amidase activity | 8 |
GO:0004046 | aminoacylase activity | 11 |
GO:0004067 | asparaginase activity | 4 |
GO:0004328 | formamidase activity | 1 |
GO:0004359 | glutaminase activity | 2 |
GO:0004407 | histone deacetylase activity | 6 |
GO:0008418 | protein-N-terminal asparagine amidohydrolase activity | 1 |
GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | 6 |
GO:0008936 | nicotinamidase activity | 5 |
GO:0009039 | urease activity | 2 |
GO:0017040 | ceramidase activity | 3 |
GO:0042586 | peptide deformylase activity | 4 |
GO:0043530 | adenosine 5'-monophosphoramidase activity | 6 |
GO:0047412 | N-(long-chain-acyl)ethanolamine deacylase activity | 1 |
GO:0050126 | N-carbamoylputrescine amidase activity | 1 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |