PLAZA 3.0 Dicots : Functional Clustering

Functional clusters

Information

Type: GO term
Identifier: GO:0016746
Description: transferase activity, transferring acyl groups

Cluster overview

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Amborella trichopoda	scaffold00025	2	CH_atr_100	11	57	0.00000108164
Amborella trichopoda	scaffold00025	5	CH_atr_34	11	57	0.00000108164
Glycine max	Gm08	1	CH_gma_301	5	8	0.000301997
Glycine max	Gm18	1	CH_gma_243	6	12	0.0000484831
Glycine max	Gm08	2	CH_gma_423	5	8	0.000538637
Glycine max	Gm18	2	CH_gma_303	6	12	0.0000968824
Glycine max	Gm18	3	CH_gma_431	6	12	0.000232826
Malus domestica	14	3	CH_mdo_397	6	16	0.00078263
Medicago truncatula	chr3	1	CH_mtr_110	8	10	0.0000000000150728
Medicago truncatula	chr5	1	CH_mtr_139	7	8	0.000000000393196
Medicago truncatula	chr7	1	CH_mtr_518	5	11	0.000466178
Medicago truncatula	chr3	2	CH_mtr_134	8	10	0.0000000000349366
Medicago truncatula	chr3	3	CH_mtr_189	8	10	0.000000000125627
Medicago truncatula	chr5	4	CH_mtr_115	13	135	0.00000100734
Medicago truncatula	chr5	5	CH_mtr_138	13	135	0.00000365361
Medicago truncatula	chr5	6	CH_mtr_188	13	135	0.0000254633
Oryza sativa ssp. japonica	11	1	CH_osa_204	6	12	0.00000758684
Oryza sativa ssp. japonica	11	2	CH_osa_211	6	12	0.0000114076
Oryza sativa ssp. japonica	11	3	CH_osa_269	6	12	0.0000230621
Physcomitrella patens	scaffold_20	1	CH_ppa_31	5	8	0.0000413251
Physcomitrella patens	scaffold_20	2	CH_ppa_38	5	8	0.0000762888
Physcomitrella patens	scaffold_20	3	CH_ppa_68	5	8	0.000177798
Ricinus communis	30147	1	CH_rco_78	9	29	0.000000264397
Ricinus communis	30147	4	CH_rco_22	10	52	0.00000348514
Ricinus communis	30147	5	CH_rco_22	10	33	0.0000000635139
Ricinus communis	30147	6	CH_rco_33	10	33	0.00000034843
Solanum lycopersicum	ch12	3	CH_sly_449	5	6	0.000108913
Solanum tuberosum	chr12	1	CH_stu_45	22	76	1.86113e-20
Solanum tuberosum	chr12	2	CH_stu_48	22	76	1.87507e-19
Solanum tuberosum	chr08	3	CH_stu_410	9	24	0.0000015959
Solanum tuberosum	chr10	3	CH_stu_426	6	7	0.00000301181
Solanum tuberosum	chr12	4	CH_stu_40	22	76	1.86113e-20
Solanum tuberosum	chr12	5	CH_stu_42	22	76	1.87507e-19
Vitis vinifera	chr16	1	CH_vvi_11	20	22	1.17588e-32
Vitis vinifera	chr16	2	CH_vvi_10	20	22	8.45017e-32
Vitis vinifera	chr16	3	CH_vvi_18	20	22	4.72976e-30
Vitis vinifera	chr16	4	CH_vvi_10	20	22	1.17588e-32
Vitis vinifera	chr16	5	CH_vvi_10	20	22	8.45017e-32
Vitis vinifera	chr16	6	CH_vvi_20	20	22	4.72976e-30

Available child term results

GO term	Description	Number of clusters
GO:0003839	gamma-glutamylcyclotransferase activity	2
GO:0003840	gamma-glutamyltransferase activity	30
GO:0003841	1-acylglycerol-3-phosphate O-acyltransferase activity	5
GO:0003846	2-acylglycerol O-acyltransferase activity	2
GO:0003852	2-isopropylmalate synthase activity	20
GO:0004026	alcohol O-acetyltransferase activity	13
GO:0004042	acetyl-CoA:L-glutamate N-acetyltransferase activity	11
GO:0004057	arginyltransferase activity	3
GO:0004108	citrate (Si)-synthase activity	12
GO:0004144	diacylglycerol O-acyltransferase activity	75
GO:0004149	dihydrolipoyllysine-residue succinyltransferase activity	4
GO:0004314	[acyl-carrier-protein] S-malonyltransferase activity	4
GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	9
GO:0004321	fatty-acyl-CoA synthase activity	19
GO:0004358	glutamate N-acetyltransferase activity	3
GO:0004366	glycerol-3-phosphate O-acyltransferase activity	1
GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	3
GO:0004402	histone acetyltransferase activity	11
GO:0004421	hydroxymethylglutaryl-CoA synthase activity	7
GO:0004474	malate synthase activity	9
GO:0004758	serine C-palmitoyltransferase activity	6
GO:0008080	N-acetyltransferase activity	58
GO:0008374	O-acyltransferase activity	8
GO:0008710	8-amino-7-oxononanoate synthase activity	4
GO:0008780	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity	2
GO:0009001	serine O-acetyltransferase activity	3
GO:0009922	fatty acid elongase activity	15
GO:0010177	2-(2'-methylthio)ethylmalate synthase activity	3
GO:0010327	acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity	10
GO:0010484	H3 histone acetyltransferase activity	4
GO:0016210	naringenin-chalcone synthase activity	3
GO:0016297	acyl-[acyl-carrier-protein] hydrolase activity	2
GO:0016407	acetyltransferase activity	2
GO:0016411	acylglycerol O-acyltransferase activity	3
GO:0016415	octanoyltransferase activity	1
GO:0016603	glutaminyl-peptide cyclotransferase activity	3
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	318
GO:0016754	sinapoylglucose-malate O-sinapoyltransferase activity	30
GO:0016756	glutathione gamma-glutamylcysteinyltransferase activity	2
GO:0017118	lipoyltransferase activity	2
GO:0033807	icosanoyl-CoA synthase activity	3
GO:0042171	lysophosphatidic acid acyltransferase activity	2
GO:0046027	phospholipid:diacylglycerol acyltransferase activity	2
GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	15
GO:0047172	shikimate O-hydroxycinnamoyltransferase activity	6
GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	4
GO:0050200	plasmalogen synthase activity	2
GO:0050736	O-malonyltransferase activity	30
GO:0080072	spermidine:sinapoyl CoA N-acyltransferase activity	4

Functional clusters experiments

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
1	GO	Primary GO data only.	2	30	80	0.001	X
2	GO	Primary and orthology projected GO data.	2	30	80	0.001	X
3	GO	All GO data.	2	30	80	0.001	X
4	GO	Primary GO data only.	10	150	300	0.001	X
5	GO	Primary and orthology projected GO data.	10	150	300	0.001	X
6	GO	All GO data.	10	150	300	0.001	X
7	GO	Primary GO data only.	2	30	80	0.001	V
8	GO	Primary and orthology projected GO data.	2	30	80	0.001	V
9	GO	All GO data.	2	30	80	0.001	V
10	GO	Primary GO data only.	10	150	300	0.001	V
11	GO	Primary and orthology projected GO data.	10	150	300	0.001	V
12	GO	All GO data.	10	150	300	0.001	V
13	InterPro	No filter applied.	2	30	80	0.001	X
14	InterPro	No filter applied.	10	150	300	0.001	X
15	InterPro	No filter applied.	2	30	80	0.001	V
16	InterPro	No filter applied.	10	150	300	0.001	V
17	MapMan	No filter applied.	2	30	80	0.001	X
18	MapMan	No filter applied.	10	150	300	0.001	X
19	MapMan	No filter applied.	2	30	80	0.001	V
20	MapMan	No filter applied.	10	150	300	0.001	V