PLAZA 3.0 Dicots : Functional Clustering

Functional clusters

Type: GO term
Identifier: GO:0016701
Description: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Vitis vinifera	chr6	6	CH_vvi_65	10	92	0.000000000215071

GO term	Description	Number of clusters
GO:0003868	4-hydroxyphenylpyruvate dioxygenase activity	15
GO:0004411	homogentisate 1,2-dioxygenase activity	6
GO:0010277	chlorophyllide a oxygenase [overall] activity	40
GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity	38
GO:0016165	linoleate 13S-lipoxygenase activity	77
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	55
GO:0018580	nitronate monooxygenase activity	12
GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	4
GO:0050313	sulfur dioxygenase activity	2
GO:1990136	linoleate 9S-lipoxygenase activity	18

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
1	GO	Primary GO data only.	2	30	80	0.001	X
2	GO	Primary and orthology projected GO data.	2	30	80	0.001	X
3	GO	All GO data.	2	30	80	0.001	X
4	GO	Primary GO data only.	10	150	300	0.001	X
5	GO	Primary and orthology projected GO data.	10	150	300	0.001	X
6	GO	All GO data.	10	150	300	0.001	X
7	GO	Primary GO data only.	2	30	80	0.001	V
8	GO	Primary and orthology projected GO data.	2	30	80	0.001	V
9	GO	All GO data.	2	30	80	0.001	V
10	GO	Primary GO data only.	10	150	300	0.001	V
11	GO	Primary and orthology projected GO data.	10	150	300	0.001	V
12	GO	All GO data.	10	150	300	0.001	V
13	InterPro	No filter applied.	2	30	80	0.001	X
14	InterPro	No filter applied.	10	150	300	0.001	X
15	InterPro	No filter applied.	2	30	80	0.001	V
16	InterPro	No filter applied.	10	150	300	0.001	V
17	MapMan	No filter applied.	2	30	80	0.001	X
18	MapMan	No filter applied.	10	150	300	0.001	X
19	MapMan	No filter applied.	2	30	80	0.001	V
20	MapMan	No filter applied.	10	150	300	0.001	V