Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0016165
- Description
- linoleate 13S-lipoxygenase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00022 | 3 | CH_atr_33 | 6 | 7 | 0.00000000000000145878 |
Amborella trichopoda | scaffold00103 | 3 | CH_atr_202 | 3 | 4 | 0.0000136382 |
Beta vulgaris | Bvchr4.sca001 | 1 | CH_bvu_42 | 4 | 4 | 0.00000000133725 |
Beta vulgaris | Bvchr4.sca004 | 1 | CH_bvu_62 | 4 | 6 | 0.0000000200444 |
Beta vulgaris | Bvchr4.sca001 | 2 | CH_bvu_50 | 4 | 4 | 0.00000000133725 |
Beta vulgaris | Bvchr4.sca004 | 2 | CH_bvu_69 | 4 | 6 | 0.0000000200444 |
Beta vulgaris | Bvchr4.sca001 | 3 | CH_bvu_66 | 4 | 4 | 0.00000000133725 |
Beta vulgaris | Bvchr4.sca004 | 3 | CH_bvu_88 | 4 | 6 | 0.0000000200444 |
Brassica rapa | A07 | 1 | CH_bra_20 | 4 | 4 | 0.000000000366945 |
Brassica rapa | A07 | 2 | CH_bra_34 | 4 | 4 | 0.000000000366945 |
Brassica rapa | A07 | 3 | CH_bra_48 | 4 | 4 | 0.000000000366945 |
Carica papaya | supercontig_32 | 3 | CH_cpa_126 | 3 | 3 | 0.0000064329 |
Carica papaya | supercontig_8 | 3 | CH_cpa_158 | 3 | 4 | 0.0000257191 |
Citrullus lanatus | Chr2 | 3 | CH_cla_5 | 11 | 13 | 1.51553e-28 |
Citrullus lanatus | Chr2 | 6 | CH_cla_5 | 11 | 13 | 1.51553e-28 |
Citrus sinensis | scaffold00033 | 1 | CH_csi_47 | 4 | 6 | 0.0000000699129 |
Citrus sinensis | scaffold00033 | 2 | CH_csi_49 | 4 | 6 | 0.000000095327 |
Citrus sinensis | scaffold00033 | 3 | CH_csi_37 | 5 | 6 | 0.0000000000353542 |
Cucumis melo | CM3.5_scaffold00022 | 2 | CH_cme_6 | 11 | 13 | 1.4826e-29 |
Cucumis melo | CM3.5_scaffold00022 | 3 | CH_cme_6 | 12 | 13 | 8.37219e-33 |
Cucumis melo | CM3.5_scaffold00022 | 5 | CH_cme_6 | 11 | 13 | 1.4826e-29 |
Cucumis melo | CM3.5_scaffold00022 | 6 | CH_cme_6 | 12 | 13 | 8.37219e-33 |
Eucalyptus grandis | scaffold_10 | 1 | CH_egr_96 | 7 | 14 | 2.08766e-16 |
Eucalyptus grandis | scaffold_8 | 1 | CH_egr_95 | 6 | 6 | 1.89645e-16 |
Eucalyptus grandis | scaffold_10 | 2 | CH_egr_128 | 7 | 14 | 2.08766e-16 |
Eucalyptus grandis | scaffold_8 | 2 | CH_egr_127 | 6 | 6 | 1.89645e-16 |
Eucalyptus grandis | scaffold_10 | 3 | CH_egr_144 | 7 | 14 | 2.08766e-16 |
Eucalyptus grandis | scaffold_8 | 3 | CH_egr_142 | 6 | 6 | 1.89645e-16 |
Fragaria vesca | LG7 | 3 | CH_fve_102 | 5 | 15 | 0.00000000586753 |
Glycine max | Gm13 | 1 | CH_gma_91 | 4 | 4 | 0.0000000153898 |
Glycine max | Gm15 | 1 | CH_gma_218 | 3 | 3 | 0.0000218908 |
Glycine max | Gm20 | 1 | CH_gma_279 | 3 | 5 | 0.000218669 |
Glycine max | Gm07 | 3 | CH_gma_85 | 5 | 5 | 0.0000000000489038 |
Glycine max | Gm08 | 3 | CH_gma_30 | 7 | 7 | 4.10134e-17 |
Gossypium raimondii | Chr04 | 1 | CH_gra_155 | 3 | 4 | 0.0000139721 |
Gossypium raimondii | Chr04 | 1 | CH_gra_107 | 4 | 7 | 0.0000000489606 |
Lotus japonicus | chr3 | 1 | CH_lja_38 | 4 | 14 | 0.00000124145 |
Malus domestica | 12 | 1 | CH_mdo_24 | 4 | 4 | 0.00000000176591 |
Malus domestica | 4 | 1 | CH_mdo_46 | 4 | 7 | 0.0000000617445 |
Malus domestica | 12 | 2 | CH_mdo_25 | 4 | 4 | 0.00000000176591 |
Malus domestica | 4 | 2 | CH_mdo_50 | 4 | 7 | 0.0000000617445 |
Malus domestica | 12 | 3 | CH_mdo_55 | 4 | 4 | 0.00000000604128 |
Malus domestica | 4 | 3 | CH_mdo_88 | 4 | 7 | 0.000000211149 |
Malus domestica | 5 | 3 | CH_mdo_54 | 4 | 4 | 0.00000000604128 |
Manihot esculenta | scaffold06407 | 3 | CH_mes_17 | 5 | 5 | 0.00000000000182826 |
Medicago truncatula | chr3 | 1 | CH_mtr_370 | 3 | 4 | 0.0000253754 |
Medicago truncatula | chr8 | 1 | CH_mtr_6 | 13 | 27 | 4.35943e-33 |
Medicago truncatula | chr3 | 2 | CH_mtr_424 | 3 | 4 | 0.0000253754 |
Medicago truncatula | chr8 | 2 | CH_mtr_8 | 13 | 27 | 4.35943e-33 |
Medicago truncatula | chr8 | 4 | CH_mtr_8 | 13 | 27 | 4.35943e-33 |
Medicago truncatula | chr8 | 5 | CH_mtr_9 | 13 | 27 | 4.35943e-33 |
Oryza sativa ssp. japonica | 12 | 1 | CH_osa_282 | 3 | 10 | 0.0000833246 |
Oryza sativa ssp. japonica | 3 | 1 | CH_osa_295 | 3 | 11 | 0.000114552 |
Oryza sativa ssp. japonica | 3 | 2 | CH_osa_310 | 3 | 11 | 0.000114552 |
Populus trichocarpa | Chr01 | 1 | CH_ptr_114 | 4 | 4 | 0.00000000179551 |
Populus trichocarpa | Chr05 | 1 | CH_ptr_130 | 4 | 5 | 0.00000000897448 |
Populus trichocarpa | Chr01 | 2 | CH_ptr_131 | 4 | 4 | 0.00000000179551 |
Populus trichocarpa | Chr05 | 2 | CH_ptr_148 | 4 | 5 | 0.00000000897448 |
Populus trichocarpa | Chr05 | 3 | CH_ptr_98 | 5 | 5 | 0.00000000000121515 |
Prunus persica | scaffold_2 | 1 | CH_ppe_188 | 3 | 3 | 0.00000283726 |
Prunus persica | scaffold_6 | 1 | CH_ppe_53 | 5 | 6 | 0.00000000000243231 |
Prunus persica | scaffold_2 | 2 | CH_ppe_214 | 3 | 3 | 0.00000283726 |
Prunus persica | scaffold_6 | 2 | CH_ppe_70 | 5 | 6 | 0.00000000000243231 |
Ricinus communis | 29851 | 3 | CH_rco_148 | 3 | 3 | 0.0000031823 |
Ricinus communis | 30169 | 3 | CH_rco_147 | 3 | 3 | 0.0000031823 |
Solanum lycopersicum | ch01 | 2 | CH_sly_39 | 7 | 7 | 3.32732e-18 |
Solanum lycopersicum | ch01 | 3 | CH_sly_53 | 7 | 7 | 9.45852e-18 |
Solanum tuberosum | chr01 | 1 | CH_stu_53 | 7 | 7 | 9.2844e-19 |
Solanum tuberosum | chr01 | 2 | CH_stu_51 | 7 | 7 | 9.2844e-19 |
Solanum tuberosum | chr01 | 3 | CH_stu_83 | 7 | 7 | 7.05395e-18 |
Solanum tuberosum | chr08 | 3 | CH_stu_117 | 6 | 6 | 0.00000000000000991081 |
Theobroma cacao | scaffold_9 | 1 | CH_tca_113 | 4 | 8 | 0.000000203264 |
Theobroma cacao | scaffold_5 | 3 | CH_tca_23 | 7 | 7 | 1.34867e-18 |
Theobroma cacao | scaffold_6 | 3 | CH_tca_66 | 5 | 5 | 0.00000000000426643 |
Vitis vinifera | chr6 | 1 | CH_vvi_85 | 5 | 11 | 0.000000000332321 |
Vitis vinifera | chr6 | 2 | CH_vvi_91 | 5 | 11 | 0.000000000332321 |
Vitis vinifera | chr6 | 3 | CH_vvi_116 | 5 | 11 | 0.000000000332321 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |