Functional clusters   top

Information

Type
GO term
Identifier
GO:0015979
Description
photosynthesis

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodachloroplast2CH_atr_325662.62258e-41
Arabidopsis lyratascaffold_22CH_aly_422802.1967e-31
Arabidopsis lyratascaffold_23CH_aly_522802.70962e-29
Arabidopsis lyratascaffold_28CH_aly_213910.0000000000000253374
Arabidopsis lyratascaffold_29CH_aly_213910.000000000000240705
Citrus sinensischloroplast2CH_csi_226694.74221e-39
Citrus sinensischloroplast3CH_csi_226695.61152e-37
Glycine maxchloroplast2CH_gma_325622.76852e-38
Glycine maxGm122CH_gma_258440.0000188221
Glycine maxGm123CH_gma_342440.0000397595
Glycine maxGm128CH_gma_2440.0000165802
Glycine maxGm129CH_gma_4440.0000334778
Lotus japonicuschloroplast2CH_lja_125632.7294e-44
Lotus japonicuschloroplast3CH_lja_125635.98669e-42
Medicago truncatulachr42CH_mtr_2748740.000000157753
Medicago truncatulachr48CH_mtr_68830.000000233418
Oryza sativa ssp. japonica22CH_osa_917150.000000000570326
Oryza sativa ssp. japonica23CH_osa_1087150.00000000119503
Oryza sativa ssp. japonica67CH_osa_15580.00000012441
Oryza sativa ssp. japonica28CH_osa_205150.0000103643
Ostreococcus lucimarinusChr_21CH_olu_4560.000000236181
Ostreococcus lucimarinusChr_22CH_olu_6560.000000808376
Ostreococcus lucimarinusChr_23CH_olu_7560.00000355953
Physcomitrella patenschloroplast2CH_ppa_124703.26832e-33

Available child term results

GO term Description Number of clusters
GO:0009765photosynthesis, light harvesting37
GO:0009769photosynthesis, light harvesting in photosystem II20
GO:0009772photosynthetic electron transport in photosystem II1
GO:0010205photoinhibition2
GO:0010270photosystem II oxygen evolving complex assembly2
GO:0019684photosynthesis, light reaction1
GO:0080005photosystem stoichiometry adjustment2

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V