Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0015203
- Description
- polyamine transmembrane transporter activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_1 | 2 | CH_aly_320 | 2 | 2 | 0.000631373 |
Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_373 | 2 | 2 | 0.000631373 |
Beta vulgaris | Bvchr4.sca001 | 2 | CH_bvu_284 | 2 | 2 | 0.000579374 |
Beta vulgaris | Bvchr4.sca001 | 3 | CH_bvu_339 | 2 | 2 | 0.000579374 |
Capsella rubella | scaffold_1 | 2 | CH_cru_342 | 2 | 2 | 0.000763242 |
Capsella rubella | scaffold_1 | 3 | CH_cru_386 | 2 | 2 | 0.000763242 |
Carica papaya | supercontig_119 | 2 | CH_cpa_211 | 2 | 2 | 0.000582496 |
Carica papaya | supercontig_119 | 3 | CH_cpa_321 | 2 | 2 | 0.000582496 |
Citrus sinensis | scaffold00043 | 2 | CH_csi_194 | 2 | 2 | 0.000694887 |
Citrus sinensis | scaffold00043 | 3 | CH_csi_248 | 2 | 2 | 0.000694887 |
Fragaria vesca | LG3 | 2 | CH_fve_147 | 3 | 6 | 0.00000602113 |
Fragaria vesca | LG3 | 3 | CH_fve_203 | 3 | 6 | 0.00000602113 |
Lotus japonicus | chr4 | 2 | CH_lja_151 | 2 | 2 | 0.000403361 |
Lotus japonicus | chr4 | 3 | CH_lja_189 | 2 | 2 | 0.000403361 |
Malus domestica | 11 | 2 | CH_mdo_55 | 3 | 3 | 0.000000111859 |
Malus domestica | 11 | 3 | CH_mdo_77 | 3 | 3 | 0.000000111859 |
Populus trichocarpa | Chr01 | 2 | CH_ptr_441 | 2 | 2 | 0.000747031 |
Populus trichocarpa | Chr01 | 3 | CH_ptr_546 | 2 | 2 | 0.000747031 |
Prunus persica | scaffold_6 | 3 | CH_ppe_194 | 3 | 3 | 0.000000155893 |
Ricinus communis | 29835 | 2 | CH_rco_110 | 3 | 5 | 0.00000144614 |
Ricinus communis | 29835 | 3 | CH_rco_141 | 3 | 5 | 0.00000144614 |
Vitis vinifera | chr2 | 2 | CH_vvi_146 | 3 | 3 | 0.000000169705 |
Vitis vinifera | chr2 | 3 | CH_vvi_182 | 3 | 3 | 0.000000169705 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |