Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0015185
- Description
- gamma-aminobutyric acid transmembrane transporter activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Eucalyptus grandis | scaffold_2 | 2 | CH_egr_783 | 2 | 2 | 0.000876399 |
Eucalyptus grandis | scaffold_7 | 2 | CH_egr_784 | 2 | 2 | 0.000876399 |
Eucalyptus grandis | scaffold_2 | 3 | CH_egr_871 | 2 | 2 | 0.000876399 |
Eucalyptus grandis | scaffold_7 | 3 | CH_egr_872 | 2 | 2 | 0.000876399 |
Glycine max | Gm12 | 2 | CH_gma_178 | 3 | 3 | 0.000000747489 |
Glycine max | Gm17 | 2 | CH_gma_177 | 3 | 3 | 0.000000747489 |
Glycine max | Gm12 | 3 | CH_gma_221 | 3 | 3 | 0.000000747489 |
Glycine max | Gm17 | 3 | CH_gma_220 | 3 | 3 | 0.000000747489 |
Gossypium raimondii | Chr06 | 3 | CH_gra_436 | 2 | 3 | 0.000961658 |
Populus trichocarpa | Chr08 | 2 | CH_ptr_430 | 2 | 2 | 0.000747031 |
Populus trichocarpa | Chr08 | 3 | CH_ptr_535 | 2 | 2 | 0.000747031 |
Vitis vinifera | chr13 | 2 | CH_vvi_153 | 3 | 4 | 0.000000339379 |
Vitis vinifera | chr13 | 3 | CH_vvi_192 | 3 | 4 | 0.000000339379 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |