Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0015144
- Description
- carbohydrate transmembrane transporter activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 1 | 1 | CH_ath_215 | 4 | 5 | 0.00003472 |
Arabidopsis thaliana | 1 | 2 | CH_ath_247 | 4 | 5 | 0.0000358214 |
Arabidopsis thaliana | 1 | 3 | CH_ath_260 | 4 | 5 | 0.0000358214 |
Brassica rapa | A01 | 3 | CH_bra_356 | 3 | 4 | 0.00087998 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0005351 | sugar:hydrogen symporter activity | 13 |
GO:0005353 | fructose transmembrane transporter activity | 2 |
GO:0008515 | sucrose transmembrane transporter activity | 11 |
GO:0015145 | monosaccharide transmembrane transporter activity | 2 |
GO:0015519 | D-xylose:hydrogen symporter activity | 3 |
GO:1901974 | glycerate transmembrane transporter activity | 4 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |