Functional clusters   top

Information

Type
GO term
Identifier
GO:0010431
Description
seed maturation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapaA062CH_bra_194350.000134825
Brassica rapaA063CH_bra_228350.000134825
Capsella rubellascaffold_52CH_cru_436100.0000000000016437
Capsella rubellascaffold_53CH_cru_496100.0000000000016437
Citrullus lanatusChr12CH_cla_102330.00000395557
Citrullus lanatusChr13CH_cla_135330.00000395557
Cucumis meloCM3.5_scaffold000012CH_cme_106330.00000399914
Cucumis meloCM3.5_scaffold000013CH_cme_159330.00000399914
Eucalyptus grandisscaffold_102CH_egr_212550.00000000000575007
Eucalyptus grandisscaffold_103CH_egr_245550.00000000000575007
Gossypium raimondiiChr012CH_gra_270370.000199022
Gossypium raimondiiChr013CH_gra_326370.000199022
Lotus japonicuschr22CH_lja_89350.0000460644
Lotus japonicuschr23CH_lja_110350.0000460644
Medicago truncatulachr62CH_mtr_467133.89452e-17
Medicago truncatulachr63CH_mtr_647133.89452e-17
Populus trichocarpaChr192CH_ptr_149440.0000000116606
Populus trichocarpaChr193CH_ptr_192440.0000000116606
Prunus persicascaffold_32CH_ppe_77560.0000000000104083
Prunus persicascaffold_33CH_ppe_93560.0000000000104083
Theobroma cacaoscaffold_42CH_tca_3173100.000379718
Theobroma cacaoscaffold_43CH_tca_3853100.000379718

Available child term results

GO term Description Number of clusters
GO:0010162seed dormancy process1
GO:0010231maintenance of seed dormancy6
GO:0048700acquisition of desiccation tolerance in seed4
GO:2000693positive regulation of seed maturation2

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V