Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0010200
- Description
- response to chitin
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Eucalyptus grandis | scaffold_5 | 2 | CH_egr_476 | 6 | 14 | 0.00000157142 |
Fragaria vesca | LG6 | 5 | CH_fve_35 | 11 | 230 | 0.00000227308 |
Fragaria vesca | LG6 | 6 | CH_fve_57 | 11 | 230 | 0.00000254843 |
Prunus persica | scaffold_6 | 2 | CH_ppe_55 | 7 | 7 | 0.00000000000026941 |
Prunus persica | scaffold_6 | 3 | CH_ppe_70 | 7 | 7 | 0.000000000000288269 |
Prunus persica | scaffold_6 | 5 | CH_ppe_100 | 10 | 181 | 0.0000555998 |
Prunus persica | scaffold_6 | 6 | CH_ppe_131 | 10 | 181 | 0.0000609885 |
Solanum tuberosum | chr03 | 2 | CH_stu_185 | 6 | 8 | 0.00000000203188 |
Solanum tuberosum | chr03 | 3 | CH_stu_253 | 6 | 8 | 0.00000000203188 |
Theobroma cacao | scaffold_3 | 2 | CH_tca_269 | 5 | 14 | 0.000161333 |
Theobroma cacao | scaffold_5 | 2 | CH_tca_215 | 6 | 21 | 0.0000204888 |
Theobroma cacao | scaffold_3 | 3 | CH_tca_331 | 5 | 14 | 0.000166971 |
Vitis vinifera | chr10 | 2 | CH_vvi_200 | 4 | 4 | 0.00000406367 |
Vitis vinifera | chr16 | 2 | CH_vvi_21 | 12 | 16 | 1.00375e-22 |
Vitis vinifera | chr10 | 3 | CH_vvi_249 | 4 | 4 | 0.00000424035 |
Vitis vinifera | chr16 | 3 | CH_vvi_26 | 12 | 16 | 1.14698e-22 |
Vitis vinifera | chr16 | 5 | CH_vvi_21 | 12 | 16 | 1.00375e-22 |
Vitis vinifera | chr16 | 6 | CH_vvi_27 | 12 | 16 | 1.14698e-22 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0071323 | cellular response to chitin | 7 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |