Functional clusters   top

Information

Type
GO term
Identifier
GO:0009607
Description
response to biotic stimulus

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodascaffold000031CH_atr_1713100.000185174
Arabidopsis lyratascaffold_11CH_aly_1454130.0000248618
Arabidopsis lyratascaffold_11CH_aly_175340.00014302
Arabidopsis lyratascaffold_21CH_aly_69101.87771e-22
Arabidopsis thaliana11CH_ath_287780.000231808
Beta vulgarisBvchr9_un.sca0011CH_bvu_83550.000000243662
Beta vulgarisBvchr9_un.sca0012CH_bvu_256550.000391894
Beta vulgarisBvchr9_un.sca0013CH_bvu_312550.000426191
Brassica rapaA021CH_bra_21560.000000000418197
Brassica rapaA071CH_bra_337530.000000010942
Brassica rapaA071CH_bra_16550.0000000000697619
Brassica rapaA081CH_bra_138420.00000000000841219
Capsella rubellascaffold_11CH_cru_159330.0000737173
Capsella rubellascaffold_11CH_cru_84440.0000000984697
Capsella rubellascaffold_21CH_cru_10892.09131e-18
Citrullus lanatusChr111CH_cla_121330.0000650279
Citrullus lanatusChr51CH_cla_41550.00000000010955
Citrullus lanatusChr51CH_cla_68440.000000085796
Citrullus lanatusChr61CH_cla_69440.000000085796
Citrullus lanatusChr91CH_cla_194350.000648937
Citrus sinensisscaffold000161CH_csi_413142.49347e-33
Citrus sinensisscaffold000341CH_csi_825270.00000858274
Citrus sinensisscaffold000163CH_csi_1413140.00000000000000517873
Citrus sinensisscaffold000164CH_csi_313142.49347e-33
Citrus sinensisscaffold000166CH_csi_913140.00000000000000517873
Cucumis meloCM3.5_scaffold000061CH_cme_117330.0000525953
Cucumis meloCM3.5_scaffold000241CH_cme_1310313.65631e-18
Cucumis meloCM3.5_scaffold000421CH_cme_406110.0000000000365782
Cucumis meloCM3.5_scaffold000244CH_cme_1010313.65631e-18
Eucalyptus grandisscaffold_11CH_egr_621392.22817e-37
Eucalyptus grandisscaffold_11CH_egr_198660.0000000000718774
Eucalyptus grandisscaffold_11CH_egr_407440.0000057993
Eucalyptus grandisscaffold_21CH_egr_5311141.21001e-20
Eucalyptus grandisscaffold_71CH_egr_4111113.35513e-23
Eucalyptus grandisscaffold_81CH_egr_130322.88921e-68
Eucalyptus grandisscaffold_91CH_egr_157780.00000000000199319
Eucalyptus grandisscaffold_12CH_egr_12121398.47452e-17
Eucalyptus grandisscaffold_12CH_egr_572660.0000446636
Eucalyptus grandisscaffold_22CH_egr_28511140.000000000571828
Eucalyptus grandisscaffold_72CH_egr_19811110.00000000000172183
Eucalyptus grandisscaffold_82CH_egr_830324.41782e-38
Eucalyptus grandisscaffold_13CH_egr_821670.000360689
Eucalyptus grandisscaffold_13CH_egr_1830371.85777e-33
Eucalyptus grandisscaffold_13CH_egr_655660.0000530717
Eucalyptus grandisscaffold_23CH_egr_34611140.000000000782912
Eucalyptus grandisscaffold_73CH_egr_22911110.00000000000236388
Eucalyptus grandisscaffold_83CH_egr_1130321.05414e-37
Eucalyptus grandisscaffold_14CH_egr_821392.22817e-37
Eucalyptus grandisscaffold_24CH_egr_5111141.21001e-20
Eucalyptus grandisscaffold_74CH_egr_4011113.35513e-23
Eucalyptus grandisscaffold_84CH_egr_141472.58274e-92
Eucalyptus grandisscaffold_15CH_egr_8221398.47452e-17
Eucalyptus grandisscaffold_25CH_egr_14011140.000000000571828
Eucalyptus grandisscaffold_75CH_egr_11911110.00000000000172183
Eucalyptus grandisscaffold_85CH_egr_440441.3394e-50
Eucalyptus grandisscaffold_16CH_egr_2531401.53624e-33
Eucalyptus grandisscaffold_26CH_egr_17211140.000000000782912
Eucalyptus grandisscaffold_76CH_egr_13711110.00000000000236388
Eucalyptus grandisscaffold_86CH_egr_640444.28725e-50
Fragaria vescaLG21CH_fve_90440.0000000959718
Fragaria vescaLG41CH_fve_315261.60878e-33
Fragaria vescascf05131581CH_fve_10891.68591e-18
Fragaria vescaLG43CH_fve_1513131.15154e-17
Fragaria vescascf05131583CH_fve_112890.0000000187507
Fragaria vescaLG44CH_fve_315261.60878e-33
Fragaria vescascf05131585CH_fve_5314820.000107127
Fragaria vescaLG46CH_fve_1113131.15154e-17
Fragaria vescascf05131586CH_fve_9014820.000135969
Glycine maxGm071CH_gma_372350.000814095
Glycine maxGm081CH_gma_305340.000325915
Glycine maxGm091CH_gma_72560.000000000592321
Glycine maxGm151CH_gma_169116.47271e-21
Glycine maxGm171CH_gma_56550.0000000000988103
Glycine maxGm152CH_gma_1159110.0000000171119
Glycine maxGm172CH_gma_444550.000685939
Glycine maxGm153CH_gma_1439110.0000000190326
Glycine maxGm173CH_gma_547550.000727873
Glycine maxGm095CH_gma_74292990.000126805
Glycine maxGm096CH_gma_97292990.000165029
Gossypium raimondiiChr021CH_gra_164470.0000204516
Gossypium raimondiiChr051CH_gra_816251.1532e-33
Gossypium raimondiiChr111CH_gra_913141.75928e-30
Gossypium raimondiiChr052CH_gra_4116250.0000000000000287745
Gossypium raimondiiChr112CH_gra_3613140.00000000000000913013
Gossypium raimondiiChr053CH_gra_6116250.0000000000000411381
Gossypium raimondiiChr113CH_gra_5213140.0000000000000122542
Gossypium raimondiiChr054CH_gra_1016251.1532e-33
Gossypium raimondiiChr114CH_gra_1213141.75928e-30
Gossypium raimondiiChr055CH_gra_2916250.0000000000000287745
Gossypium raimondiiChr115CH_gra_2613140.00000000000000913013
Gossypium raimondiiChr115CH_gra_58342910.000000939338
Gossypium raimondiiChr056CH_gra_4116250.0000000000000411381
Gossypium raimondiiChr116CH_gra_67352910.000000391289
Gossypium raimondiiChr116CH_gra_3513140.0000000000000122542
Lotus japonicuschr61CH_lja_28114.15074e-21
Lotus japonicuschr65CH_lja_510270.000000643249
Lotus japonicuschr66CH_lja_1010270.000000717245
Malus domestica131CH_mdo_131330.0000518228
Malus domestica131CH_mdo_112151.12572e-29
Malus domestica161CH_mdo_49390.00000000000000823697
Malus domestica161CH_mdo_106120.0000000000465525
Malus domestica132CH_mdo_412150.00000000000000369474
Malus domestica162CH_mdo_15710440.0000548154
Malus domestica162CH_mdo_2676120.000530528
Malus domestica133CH_mdo_712150.00000000000000515527
Malus domestica163CH_mdo_21110440.0000714129
Malus domestica163CH_mdo_3706120.00062517
Malus domestica134CH_mdo_112151.12572e-29
Malus domestica164CH_mdo_210440.0000000000000140792
Malus domestica135CH_mdo_112150.00000000000000369474
Malus domestica165CH_mdo_3110440.0000548154
Malus domestica136CH_mdo_512150.00000000000000515527
Malus domestica166CH_mdo_3910440.0000714129
Malus domestica137CH_mdo_1330.00000104198
Manihot esculentascaffold003181CH_mes_118330.000166767
Manihot esculentascaffold015511CH_mes_69105.26334e-20
Manihot esculentascaffold019451CH_mes_51440.000000316597
Manihot esculentascaffold047161CH_mes_311131.03678e-24
Manihot esculentascaffold093541CH_mes_27550.000000000586039
Manihot esculentascaffold015513CH_mes_449100.00000000408977
Manihot esculentascaffold047163CH_mes_2511130.000000000027527
Manihot esculentascaffold093543CH_mes_253550.000523798
Manihot esculentascaffold047164CH_mes_311131.03678e-24
Manihot esculentascaffold015515CH_mes_1010220.00000454937
Manihot esculentascaffold015516CH_mes_1810220.00000582827
Manihot esculentascaffold047166CH_mes_811130.000000000027527
Medicago truncatulachr11CH_mtr_378330.0000294005
Medicago truncatulachr21CH_mtr_1911271.77234e-23
Medicago truncatulachr41CH_mtr_3774150.0000293574
Medicago truncatulachr81CH_mtr_2611403.11908e-21
Medicago truncatulachr22CH_mtr_17810170.00000000113857
Medicago truncatulachr82CH_mtr_3329210.00000101681
Medicago truncatulachr23CH_mtr_21810170.00000000127652
Medicago truncatulachr83CH_mtr_4059210.00000112592
Medicago truncatulachr24CH_mtr_2111271.77234e-23
Medicago truncatulachr84CH_mtr_2811403.11908e-21
Medicago truncatulachr25CH_mtr_8710170.00000000113857
Medicago truncatulachr85CH_mtr_13011400.00000154792
Medicago truncatulachr26CH_mtr_10210170.00000000127652
Medicago truncatulachr86CH_mtr_15011400.00000174916
Oryza sativa ssp. japonica121CH_osa_77560.0000000000419814
Oryza sativa ssp. japonica122CH_osa_268560.0000496451
Populus trichocarpaChr081CH_ptr_269330.0000922822
Populus trichocarpaChr081CH_ptr_418114.09845e-17
Populus trichocarpaChr101CH_ptr_169450.000000585401
Populus trichocarpaChr111CH_ptr_145440.0000001172
Populus trichocarpascaffold_271CH_ptr_270330.0000922822
Prunus persicascaffold_11CH_ppe_1112209.68563e-25
Prunus persicascaffold_11CH_ppe_218196.44399e-46
Prunus persicascaffold_41CH_ppe_268330.000152775
Prunus persicascaffold_12CH_ppe_9812200.000000000563746
Prunus persicascaffold_12CH_ppe_1818194.22449e-23
Prunus persicascaffold_13CH_ppe_11912200.000000000741177
Prunus persicascaffold_13CH_ppe_2118196.42195e-23
Prunus persicascaffold_14CH_ppe_218196.44399e-46
Prunus persicascaffold_14CH_ppe_1012209.68563e-25
Prunus persicascaffold_15CH_ppe_4712200.000000000563746
Prunus persicascaffold_15CH_ppe_1318194.22449e-23
Prunus persicascaffold_16CH_ppe_1818196.42195e-23
Prunus persicascaffold_16CH_ppe_6412200.000000000741177
Ricinus communis291681CH_rco_142330.0000946734
Ricinus communis297261CH_rco_411151.84665e-24
Ricinus communis298891CH_rco_10774.7517e-16
Ricinus communis297263CH_rco_3512150.00000000000125464
Ricinus communis298893CH_rco_111770.000000216172
Ricinus communis297264CH_rco_411151.84665e-24
Ricinus communis297266CH_rco_1812150.00000000000125464
Solanum lycopersicumch041CH_sly_648160.000000000000154338
Solanum lycopersicumch051CH_sly_1006100.000000000637891
Solanum lycopersicumch091CH_sly_191440.000000726979
Solanum lycopersicumch091CH_sly_3534110.000237094
Solanum lycopersicumch091CH_sly_113550.00000000150168
Solanum lycopersicumch092CH_sly_390550.000271667
Solanum lycopersicumch053CH_sly_3607100.0000197837
Solanum lycopersicumch093CH_sly_523550.000298779
Solanum tuberosumchr091CH_stu_1338390.0000000000513784
Solanum tuberosumchr091CH_stu_151550.000000000301013
Solanum tuberosumchr092CH_stu_503550.000331086
Solanum tuberosumchr092CH_stu_502550.000331086
Solanum tuberosumchr093CH_stu_701550.000368763
Solanum tuberosumchr093CH_stu_700550.000368763
Thellungiella parvulach1-11CH_tpa_17580.000000000259353
Thellungiella parvulach5-61CH_tpa_8550.00000000000463877
Theobroma cacaoscaffold_21CH_tca_1710221.83542e-18
Theobroma cacaoscaffold_41CH_tca_912169.95444e-27
Theobroma cacaoscaffold_22CH_tca_17010220.00000230821
Theobroma cacaoscaffold_42CH_tca_4612160.00000000000538803
Theobroma cacaoscaffold_23CH_tca_22210220.00000258244
Theobroma cacaoscaffold_43CH_tca_7112160.00000000000618433
Theobroma cacaoscaffold_24CH_tca_1410221.83542e-18
Theobroma cacaoscaffold_44CH_tca_812169.95444e-27
Theobroma cacaoscaffold_25CH_tca_5410220.00000230821
Theobroma cacaoscaffold_45CH_tca_2112160.00000000000538803
Theobroma cacaoscaffold_26CH_tca_8010220.00000258244
Theobroma cacaoscaffold_46CH_tca_3312160.00000000000618433
Vitis viniferachr11CH_vvi_1810107.16618e-26
Vitis viniferachr51CH_vvi_714143.66059e-38
Vitis viniferachr12CH_vvi_6610100.0000000000044713
Vitis viniferachr52CH_vvi_3414142.10765e-18
Vitis viniferachr13CH_vvi_8910100.00000000000507741
Vitis viniferachr53CH_vvi_4314142.51948e-18
Vitis viniferachr14CH_vvi_1710107.16618e-26
Vitis viniferachr54CH_vvi_714143.66059e-38
Vitis viniferachr15CH_vvi_4110100.0000000000044713
Vitis viniferachr55CH_vvi_2814142.10765e-18
Vitis viniferachr16CH_vvi_5810100.00000000000507741
Vitis viniferachr56CH_vvi_4014142.51948e-18
Zea mays11CH_zma_104330.00000767901

Available child term results

GO term Description Number of clusters
GO:0002213defense response to insect2
GO:0002215defense response to nematode12
GO:0002229defense response to oomycetes4
GO:0002230positive regulation of defense response to virus by host23
GO:0002238response to molecule of fungal origin15
GO:0002831regulation of response to biotic stimulus4
GO:0006983ER overload response2
GO:0009615response to virus60
GO:0009616virus induced gene silencing5
GO:0009617response to bacterium14
GO:0009620response to fungus6
GO:0009624response to nematode14
GO:0009625response to insect2
GO:0009814defense response, incompatible interaction3
GO:0009816defense response to bacterium, incompatible interaction20
GO:0009817defense response to fungus, incompatible interaction5
GO:0009818defense response to protozoan, incompatible interaction1
GO:0009861jasmonic acid and ethylene-dependent systemic resistance8
GO:0009864induced systemic resistance, jasmonic acid mediated signaling pathway1
GO:0009866induced systemic resistance, ethylene mediated signaling pathway1
GO:0009868jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway2
GO:0010113negative regulation of systemic acquired resistance1
GO:0016045detection of bacterium2
GO:0034263autophagy in response to ER overload1
GO:0042742defense response to bacterium22
GO:0050688regulation of defense response to virus4
GO:0050691regulation of defense response to virus by host4
GO:0050832defense response to fungus35
GO:0051607defense response to virus4
GO:0051707response to other organism21
GO:0052033pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response10
GO:0060154cellular process regulating host cell cycle in response to virus2
GO:0080185effector dependent induction by symbiont of host immune response2
GO:0098542defense response to other organism4
GO:1900425negative regulation of defense response to bacterium25
GO:1902290positive regulation of defense response to oomycetes14

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V