Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0009505
- Description
- plant-type cell wall
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 1 | 2 | CH_ath_298 | 11 | 80 | 0.000105182 |
Arabidopsis thaliana | 1 | 2 | CH_ath_341 | 6 | 14 | 0.000262769 |
Arabidopsis thaliana | 1 | 3 | CH_ath_361 | 6 | 14 | 0.000262769 |
Arabidopsis thaliana | 1 | 3 | CH_ath_312 | 11 | 80 | 0.000105182 |
Arabidopsis thaliana | 1 | 5 | CH_ath_106 | 11 | 80 | 0.000105182 |
Arabidopsis thaliana | 1 | 6 | CH_ath_111 | 11 | 80 | 0.000105182 |
Beta vulgaris | Bvchr1.sca002 | 2 | CH_bvu_83 | 8 | 20 | 0.0000000792358 |
Beta vulgaris | Bvchr1.sca002 | 3 | CH_bvu_100 | 8 | 20 | 0.0000000792358 |
Beta vulgaris | Bvchr1.sca002 | 5 | CH_bvu_31 | 10 | 80 | 0.0000475258 |
Beta vulgaris | Bvchr1.sca002 | 6 | CH_bvu_42 | 10 | 80 | 0.0000475258 |
Capsella rubella | scaffold_1 | 5 | CH_cru_63 | 10 | 60 | 0.0000408978 |
Capsella rubella | scaffold_1 | 6 | CH_cru_82 | 10 | 60 | 0.0000408978 |
Carica papaya | supercontig_97 | 3 | CH_cpa_179 | 4 | 4 | 0.0000721892 |
Eucalyptus grandis | scaffold_6 | 3 | CH_egr_546 | 5 | 5 | 0.00000177003 |
Eucalyptus grandis | scaffold_1 | 5 | CH_egr_187 | 17 | 207 | 0.000000192586 |
Eucalyptus grandis | scaffold_1 | 6 | CH_egr_213 | 17 | 207 | 0.000000192586 |
Fragaria vesca | LG3 | 2 | CH_fve_118 | 6 | 12 | 0.000000852436 |
Glycine max | Gm15 | 2 | CH_gma_133 | 11 | 59 | 0.0000000689418 |
Glycine max | Gm15 | 3 | CH_gma_164 | 11 | 59 | 0.0000000689418 |
Glycine max | Gm15 | 5 | CH_gma_43 | 11 | 59 | 0.0000000689418 |
Glycine max | Gm15 | 6 | CH_gma_59 | 11 | 59 | 0.0000000689418 |
Manihot esculenta | scaffold03741 | 2 | CH_mes_117 | 5 | 8 | 0.0000762954 |
Populus trichocarpa | Chr11 | 2 | CH_ptr_371 | 5 | 9 | 0.000236836 |
Populus trichocarpa | Chr11 | 3 | CH_ptr_462 | 5 | 9 | 0.000236836 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |