Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0009408
- Description
- response to heat
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00146 | 2 | CH_atr_74 | 5 | 5 | 0.000000105361 |
Amborella trichopoda | scaffold00022 | 3 | CH_atr_360 | 7 | 54 | 0.000791167 |
Amborella trichopoda | scaffold00146 | 3 | CH_atr_120 | 5 | 5 | 0.000000173176 |
Beta vulgaris | Bvchr4.sca003 | 3 | CH_bvu_131 | 5 | 5 | 0.000000727289 |
Beta vulgaris | Bvchr4.sca003 | 9 | CH_bvu_2 | 5 | 5 | 0.000000261394 |
Brassica rapa | A04 | 1 | CH_bra_177 | 3 | 5 | 0.000722634 |
Brassica rapa | A08 | 5 | CH_bra_38 | 10 | 100 | 0.000767547 |
Carica papaya | supercontig_81 | 3 | CH_cpa_24 | 10 | 21 | 0.0000000000011943 |
Carica papaya | supercontig_81 | 6 | CH_cpa_11 | 10 | 21 | 0.0000000000011943 |
Citrullus lanatus | Chr7 | 3 | CH_cla_177 | 4 | 4 | 0.0000800178 |
Eucalyptus grandis | scaffold_3 | 1 | CH_egr_16 | 14 | 24 | 4.59777e-31 |
Eucalyptus grandis | scaffold_3 | 2 | CH_egr_55 | 15 | 25 | 1.48852e-22 |
Eucalyptus grandis | scaffold_3 | 3 | CH_egr_74 | 15 | 25 | 5.77822e-22 |
Eucalyptus grandis | scaffold_3 | 4 | CH_egr_21 | 14 | 24 | 4.59777e-31 |
Eucalyptus grandis | scaffold_3 | 5 | CH_egr_52 | 15 | 25 | 1.48852e-22 |
Eucalyptus grandis | scaffold_3 | 6 | CH_egr_64 | 15 | 25 | 5.77822e-22 |
Glycine max | Gm07 | 3 | CH_gma_228 | 6 | 9 | 0.00000100068 |
Malus domestica | 11 | 3 | CH_mdo_133 | 5 | 7 | 0.00000265237 |
Malus domestica | 8 | 3 | CH_mdo_416 | 4 | 7 | 0.000900136 |
Manihot esculenta | scaffold06512 | 3 | CH_mes_98 | 6 | 9 | 0.000000859022 |
Medicago truncatula | chr1 | 3 | CH_mtr_403 | 5 | 6 | 0.00000111013 |
Oryza sativa ssp. japonica | 1 | 1 | CH_osa_156 | 4 | 5 | 0.000000309911 |
Oryza sativa ssp. japonica | 1 | 3 | CH_osa_138 | 5 | 5 | 0.0000000340735 |
Prunus persica | scaffold_6 | 3 | CH_ppe_101 | 8 | 11 | 0.0000000000361707 |
Ricinus communis | 29751 | 3 | CH_rco_68 | 9 | 25 | 0.0000000030222 |
Solanum lycopersicum | ch06 | 3 | CH_sly_646 | 4 | 6 | 0.000938786 |
Solanum tuberosum | chr09 | 1 | CH_stu_199 | 4 | 4 | 0.0000000408657 |
Solanum tuberosum | chr09 | 2 | CH_stu_374 | 4 | 4 | 0.0000387861 |
Solanum tuberosum | chr06 | 3 | CH_stu_422 | 5 | 6 | 0.00000280804 |
Solanum tuberosum | chr09 | 3 | CH_stu_217 | 7 | 8 | 0.000000000162592 |
Solanum tuberosum | chr09 | 3 | CH_stu_567 | 4 | 4 | 0.0000709491 |
Theobroma cacao | scaffold_9 | 3 | CH_tca_107 | 7 | 11 | 0.00000000603272 |
Theobroma cacao | scaffold_9 | 6 | CH_tca_97 | 13 | 209 | 0.0000711711 |
Vitis vinifera | chr13 | 3 | CH_vvi_35 | 14 | 26 | 1.78547e-19 |
Vitis vinifera | chr4 | 3 | CH_vvi_67 | 9 | 10 | 0.000000000000012827 |
Vitis vinifera | chr13 | 6 | CH_vvi_33 | 14 | 26 | 1.78547e-19 |
Vitis vinifera | chr4 | 6 | CH_vvi_75 | 10 | 47 | 0.0000000367776 |
Zea mays | 3 | 3 | CH_zma_163 | 5 | 8 | 0.0000136007 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0010286 | heat acclimation | 12 |
GO:0034605 | cellular response to heat | 2 |
GO:0070370 | cellular heat acclimation | 1 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |