Functional clusters   top

Information

Type
GO term
Identifier
GO:0008299
Description
isoprenoid biosynthetic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyratascaffold_31CH_aly_218350.000589719
Arabidopsis thaliana31CH_ath_162690.00000277528
Citrullus lanatusChr101CH_cla_193350.000591716
Citrus sinensisscaffold001971CH_csi_48440.0000000818017
Citrus sinensisscaffold001972CH_csi_88440.00000598003
Citrus sinensisscaffold001973CH_csi_109440.0000063077
Gossypium raimondiiChr111CH_gra_278340.000896208
Solanum lycopersicumch101CH_sly_418340.0006413
Solanum tuberosumchr021CH_stu_350330.0000480357
Thellungiella parvulach3-11CH_tpa_87330.0000620034
Theobroma cacaoscaffold_41CH_tca_290350.000586995

Available child term results

GO term Description Number of clusters
GO:0010263tricyclic triterpenoid biosynthetic process5
GO:0010322regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2
GO:0010371regulation of gibberellin biosynthetic process2
GO:0010373negative regulation of gibberellin biosynthetic process2
GO:0010686tetracyclic triterpenoid biosynthetic process12
GO:0016099monoterpenoid biosynthetic process2
GO:0016114terpenoid biosynthetic process2
GO:0016117carotenoid biosynthetic process3
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway9
GO:0019408dolichol biosynthetic process10
GO:0019745pentacyclic triterpenoid biosynthetic process8
GO:0043693monoterpene biosynthetic process2
GO:0045337farnesyl diphosphate biosynthetic process6
GO:0046246terpene biosynthetic process4
GO:0051762sesquiterpene biosynthetic process2
GO:0090359negative regulation of abscisic acid biosynthetic process6
GO:1901601strigolactone biosynthetic process2

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V