Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0008026
- Description
- ATP-dependent helicase activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00005 | 3 | CH_atr_225 | 4 | 5 | 0.0000585971 |
Amborella trichopoda | scaffold00020 | 3 | CH_atr_361 | 4 | 8 | 0.000811349 |
Carica papaya | supercontig_30 | 9 | CH_cpa_25 | 3 | 3 | 0.000989592 |
Chlamydomonas reinhardtii | chromosome_7 | 3 | CH_cre_48 | 4 | 4 | 0.0000206365 |
Chlamydomonas reinhardtii | chromosome_7 | 9 | CH_cre_5 | 4 | 4 | 0.0000156732 |
Cucumis melo | CM3.5_scaffold00008 | 3 | CH_cme_181 | 4 | 4 | 0.0000200394 |
Cucumis melo | CM3.5_scaffold00038 | 3 | CH_cme_55 | 10 | 31 | 0.000000000013753 |
Cucumis melo | CM3.5_scaffold00038 | 6 | CH_cme_23 | 10 | 31 | 0.000000000013753 |
Cucumis melo | CM3.5_scaffold00038 | 9 | CH_cme_2 | 7 | 31 | 0.000000144401 |
Eucalyptus grandis | scaffold_11 | 3 | CH_egr_268 | 7 | 9 | 0.0000000000271589 |
Eucalyptus grandis | scaffold_5 | 3 | CH_egr_123 | 10 | 12 | 3.26381e-18 |
Eucalyptus grandis | scaffold_5 | 6 | CH_egr_88 | 10 | 12 | 3.26381e-18 |
Eucalyptus grandis | scaffold_8 | 9 | CH_egr_3 | 4 | 6 | 0.0000196358 |
Manihot esculenta | scaffold06656 | 3 | CH_mes_119 | 4 | 4 | 0.00000685648 |
Medicago truncatula | chr7 | 1 | CH_mtr_556 | 3 | 3 | 0.000673692 |
Medicago truncatula | chr8 | 1 | CH_mtr_557 | 3 | 4 | 0.000673692 |
Medicago truncatula | chr7 | 2 | CH_mtr_676 | 3 | 3 | 0.000717301 |
Medicago truncatula | chr8 | 2 | CH_mtr_677 | 3 | 4 | 0.000717301 |
Populus trichocarpa | Chr12 | 3 | CH_ptr_534 | 4 | 8 | 0.000733622 |
Solanum tuberosum | chr06 | 3 | CH_stu_487 | 4 | 4 | 0.000015691 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0004003 | ATP-dependent DNA helicase activity | 4 |
GO:0004004 | ATP-dependent RNA helicase activity | 2 |
GO:0043141 | ATP-dependent 5'-3' DNA helicase activity | 14 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |