Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0006915
- Description
- apoptotic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis lyrata | scaffold_8 | 3 | CH_aly_98 | 6 | 7 | 0.0000000121905 |
Arabidopsis lyrata | scaffold_8 | 9 | CH_aly_5 | 5 | 6 | 0.000000066261 |
Beta vulgaris | Bvchr3.sca003 | 3 | CH_bvu_193 | 5 | 8 | 0.0000294042 |
Beta vulgaris | Bvchr4.sca015 | 3 | CH_bvu_349 | 7 | 42 | 0.000639464 |
Capsella rubella | scaffold_2 | 3 | CH_cru_77 | 8 | 17 | 0.000000000277718 |
Carica papaya | supercontig_92 | 3 | CH_cpa_285 | 3 | 3 | 0.000312455 |
Citrullus lanatus | Chr9 | 1 | CH_cla_164 | 2 | 2 | 0.000255341 |
Citrullus lanatus | Chr9 | 2 | CH_cla_195 | 2 | 2 | 0.000255341 |
Citrullus lanatus | Chr9 | 3 | CH_cla_257 | 2 | 2 | 0.000255341 |
Citrus sinensis | scaffold00109 | 3 | CH_csi_218 | 4 | 5 | 0.000386709 |
Glycine max | Gm07 | 1 | CH_gma_247 | 8 | 37 | 0.0000607076 |
Glycine max | Gm18 | 1 | CH_gma_175 | 11 | 75 | 0.00000383195 |
Glycine max | Gm07 | 2 | CH_gma_294 | 8 | 37 | 0.0000607076 |
Glycine max | Gm18 | 2 | CH_gma_214 | 11 | 75 | 0.00000383195 |
Glycine max | Gm15 | 3 | CH_gma_32 | 14 | 29 | 5.82102e-17 |
Glycine max | Gm17 | 3 | CH_gma_278 | 6 | 10 | 0.00000523416 |
Glycine max | Gm18 | 3 | CH_gma_268 | 11 | 75 | 0.00000383195 |
Glycine max | Gm19 | 3 | CH_gma_24 | 18 | 59 | 2.14458e-18 |
Glycine max | Gm07 | 4 | CH_gma_84 | 12 | 155 | 0.000932376 |
Glycine max | Gm13 | 4 | CH_gma_22 | 18 | 97 | 0.00000000000000585014 |
Glycine max | Gm18 | 4 | CH_gma_48 | 11 | 75 | 0.00000383195 |
Glycine max | Gm07 | 5 | CH_gma_97 | 12 | 155 | 0.000932376 |
Glycine max | Gm18 | 5 | CH_gma_56 | 11 | 75 | 0.00000383195 |
Glycine max | Gm13 | 6 | CH_gma_26 | 18 | 97 | 0.00000000000000585014 |
Glycine max | Gm15 | 6 | CH_gma_21 | 14 | 29 | 5.82102e-17 |
Glycine max | Gm18 | 6 | CH_gma_67 | 11 | 75 | 0.00000383195 |
Glycine max | Gm19 | 6 | CH_gma_18 | 18 | 59 | 2.14458e-18 |
Gossypium raimondii | Chr09 | 3 | CH_gra_5 | 30 | 80 | 1.90947e-37 |
Manihot esculenta | scaffold03079 | 1 | CH_mes_183 | 2 | 2 | 0.000949127 |
Manihot esculenta | scaffold04233 | 1 | CH_mes_182 | 2 | 2 | 0.000949127 |
Manihot esculenta | scaffold03079 | 2 | CH_mes_241 | 2 | 2 | 0.000949127 |
Manihot esculenta | scaffold04233 | 2 | CH_mes_240 | 2 | 2 | 0.000949127 |
Manihot esculenta | scaffold03079 | 3 | CH_mes_309 | 2 | 2 | 0.000949127 |
Manihot esculenta | scaffold04233 | 3 | CH_mes_308 | 2 | 2 | 0.000949127 |
Physcomitrella patens | scaffold_1 | 3 | CH_ppa_25 | 5 | 8 | 0.000000350181 |
Populus trichocarpa | Chr17 | 2 | CH_ptr_235 | 6 | 8 | 0.00000480896 |
Populus trichocarpa | Chr03 | 3 | CH_ptr_177 | 11 | 31 | 0.00000000390109 |
Populus trichocarpa | Chr14 | 3 | CH_ptr_139 | 16 | 78 | 0.000000000149705 |
Populus trichocarpa | scaffold_42 | 3 | CH_ptr_240 | 8 | 16 | 0.00000033742 |
Populus trichocarpa | Chr17 | 4 | CH_ptr_22 | 35 | 242 | 1.4025e-21 |
Populus trichocarpa | Chr03 | 6 | CH_ptr_82 | 11 | 31 | 0.00000000390109 |
Populus trichocarpa | Chr14 | 6 | CH_ptr_46 | 22 | 102 | 3.06967e-16 |
Prunus persica | scaffold_1 | 3 | CH_ppe_59 | 17 | 51 | 0.000000000000019659 |
Prunus persica | scaffold_3 | 3 | CH_ppe_195 | 7 | 9 | 0.000000163067 |
Prunus persica | scaffold_5 | 3 | CH_ppe_222 | 7 | 10 | 0.000000536491 |
Prunus persica | scaffold_6 | 3 | CH_ppe_304 | 5 | 5 | 0.0000210285 |
Prunus persica | scaffold_7 | 3 | CH_ppe_131 | 12 | 35 | 0.00000000197672 |
Prunus persica | scaffold_8 | 3 | CH_ppe_34 | 22 | 77 | 6.25151e-18 |
Prunus persica | scaffold_1 | 6 | CH_ppe_40 | 17 | 51 | 0.000000000000019659 |
Prunus persica | scaffold_8 | 6 | CH_ppe_24 | 39 | 290 | 4.90134e-21 |
Solanum lycopersicum | ch04 | 2 | CH_sly_232 | 5 | 6 | 0.00000427046 |
Solanum lycopersicum | ch04 | 2 | CH_sly_43 | 13 | 23 | 4.963e-18 |
Solanum lycopersicum | ch04 | 2 | CH_sly_75 | 8 | 9 | 0.00000000000236309 |
Solanum lycopersicum | ch04 | 2 | CH_sly_440 | 4 | 5 | 0.00049234 |
Solanum lycopersicum | ch06 | 2 | CH_sly_494 | 7 | 43 | 0.000950305 |
Solanum lycopersicum | ch06 | 2 | CH_sly_221 | 6 | 11 | 0.00000230967 |
Solanum lycopersicum | ch07 | 2 | CH_sly_233 | 5 | 6 | 0.00000427046 |
Solanum lycopersicum | ch09 | 2 | CH_sly_333 | 4 | 4 | 0.0000990437 |
Solanum lycopersicum | ch04 | 3 | CH_sly_293 | 5 | 6 | 0.00000427046 |
Solanum lycopersicum | ch04 | 3 | CH_sly_50 | 13 | 23 | 4.963e-18 |
Solanum lycopersicum | ch07 | 3 | CH_sly_294 | 5 | 6 | 0.00000427046 |
Solanum lycopersicum | ch09 | 3 | CH_sly_442 | 4 | 4 | 0.0000990437 |
Solanum lycopersicum | ch04 | 4 | CH_sly_22 | 30 | 266 | 4.91613e-22 |
Solanum lycopersicum | ch04 | 5 | CH_sly_22 | 30 | 266 | 4.91613e-22 |
Solanum lycopersicum | ch04 | 6 | CH_sly_31 | 30 | 266 | 4.91613e-22 |
Zea mays | 9 | 1 | CH_zma_224 | 2 | 2 | 0.000754375 |
Zea mays | 9 | 2 | CH_zma_240 | 2 | 2 | 0.000754375 |
Zea mays | 9 | 3 | CH_zma_325 | 2 | 2 | 0.000754375 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0019050 | suppression by virus of host apoptotic process | 3 |
GO:0043066 | negative regulation of apoptotic process | 9 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |