Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0006591
- Description
- ornithine metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Beta vulgaris | Bvchr2_un.sca003 | 2 | CH_bvu_167 | 3 | 8 | 0.0000657081 |
Beta vulgaris | Bvchr2_un.sca003 | 3 | CH_bvu_212 | 3 | 8 | 0.0000657081 |
Cucumis melo | CM3.5_scaffold00016 | 2 | CH_cme_94 | 3 | 3 | 0.00000105472 |
Cucumis melo | CM3.5_scaffold00016 | 3 | CH_cme_145 | 3 | 3 | 0.00000105472 |
Solanum lycopersicum | ch08 | 2 | CH_sly_28 | 8 | 11 | 2.16339e-20 |
Solanum lycopersicum | ch08 | 3 | CH_sly_33 | 8 | 11 | 2.16339e-20 |
Solanum tuberosum | chr08 | 2 | CH_stu_25 | 10 | 13 | 2.49744e-26 |
Solanum tuberosum | chr08 | 2 | CH_stu_569 | 3 | 9 | 0.000824241 |
Solanum tuberosum | chr08 | 3 | CH_stu_40 | 10 | 13 | 2.49744e-26 |
Solanum tuberosum | chr08 | 3 | CH_stu_762 | 3 | 9 | 0.000824241 |
Solanum tuberosum | chr08 | 5 | CH_stu_24 | 10 | 13 | 2.49744e-26 |
Solanum tuberosum | chr08 | 6 | CH_stu_40 | 10 | 13 | 2.49744e-26 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0033387 | putrescine biosynthetic process from ornithine | 8 |
GO:0042450 | arginine biosynthetic process via ornithine | 1 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |