Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0006576
- Description
- cellular biogenic amine metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Ricinus communis | 30170 | 1 | CH_rco_109 | 4 | 10 | 0.00000887102 |
Ricinus communis | 30170 | 2 | CH_rco_147 | 4 | 10 | 0.0000598792 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0000162 | tryptophan biosynthetic process | 1 |
GO:0006568 | tryptophan metabolic process | 1 |
GO:0006569 | tryptophan catabolic process | 20 |
GO:0006580 | ethanolamine metabolic process | 2 |
GO:0006596 | polyamine biosynthetic process | 8 |
GO:0006597 | spermine biosynthetic process | 10 |
GO:0006598 | polyamine catabolic process | 5 |
GO:0006656 | phosphatidylcholine biosynthetic process | 4 |
GO:0009445 | putrescine metabolic process | 1 |
GO:0009446 | putrescine biosynthetic process | 1 |
GO:0030418 | nicotianamine biosynthetic process | 11 |
GO:0033387 | putrescine biosynthetic process from ornithine | 8 |
GO:0033388 | putrescine biosynthetic process from arginine | 2 |
GO:0042439 | ethanolamine-containing compound metabolic process | 1 |
GO:0070291 | N-acylethanolamine metabolic process | 3 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |