Functional clusters   top

Information

Type
GO term
Identifier
GO:0006511
Description
ubiquitin-dependent protein catabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyratascaffold_42CH_aly_178660.00000895658
Arabidopsis lyratascaffold_52CH_aly_276550.000350657
Arabidopsis lyratascaffold_62CH_aly_1009130.0000000965686
Arabidopsis lyratascaffold_43CH_aly_210660.0000104404
Arabidopsis lyratascaffold_53CH_aly_344550.000398408
Arabidopsis lyratascaffold_63CH_aly_1269130.000000121289
Arabidopsis lyratascaffold_74CH_aly_28101320.0000286486
Arabidopsis lyratascaffold_25CH_aly_3112360.00000172029
Arabidopsis lyratascaffold_65CH_aly_2810200.000000550888
Arabidopsis lyratascaffold_16CH_aly_101181390.000931625
Arabidopsis lyratascaffold_26CH_aly_4312360.00000230529
Arabidopsis lyratascaffold_66CH_aly_3610200.000000707321
Arabidopsis thaliana12CH_ath_29510350.0000996716
Arabidopsis thaliana22CH_ath_2247100.00000965198
Arabidopsis thaliana42CH_ath_29014800.0000791324
Arabidopsis thaliana42CH_ath_202660.00000388118
Arabidopsis thaliana52CH_ath_1678120.000000855658
Arabidopsis thaliana13CH_ath_31510350.000113219
Arabidopsis thaliana23CH_ath_2397100.0000105931
Arabidopsis thaliana43CH_ath_215660.00000420601
Arabidopsis thaliana53CH_ath_1808120.000000951562
Arabidopsis thaliana55CH_ath_8211410.0000337601
Arabidopsis thaliana56CH_ath_9211410.0000388152
Beta vulgarisBvchr2.sca0011CH_bvu_226330.00094448
Brassica rapaA012CH_bra_101660.00000169387
Brassica rapaA042CH_bra_181550.0000911411
Brassica rapaA052CH_bra_1838210.0000955729
Brassica rapaA052CH_bra_1779290.0000772434
Brassica rapaA013CH_bra_123660.00000190713
Brassica rapaA043CH_bra_218550.000100601
Brassica rapaA053CH_bra_2218210.00011148
Brassica rapaA053CH_bra_2179290.0000916882
Brassica rapaA055CH_bra_25191790.0000563418
Brassica rapaA056CH_bra_39191790.0000777088
Capsella rubellascaffold_51CH_cru_612134.36166e-22
Capsella rubellascaffold_52CH_cru_3212130.0000000000000571558
Capsella rubellascaffold_23CH_cru_11418710.0000000203669
Capsella rubellascaffold_54CH_cru_512134.36166e-22
Capsella rubellascaffold_55CH_cru_1212130.0000000000000571558
Capsella rubellascaffold_26CH_cru_69313000.0000145225
Eucalyptus grandisscaffold_91CH_egr_368440.00000121163
Eucalyptus grandisscaffold_52CH_egr_4096100.000000230089
Eucalyptus grandisscaffold_92CH_egr_564440.0000356803
Eucalyptus grandisscaffold_53CH_egr_860460.000686627
Eucalyptus grandisscaffold_53CH_egr_4886100.00000033945
Fragaria vescaLG71CH_fve_144450.000016579
Fragaria vescaLG72CH_fve_260450.000191146
Gossypium raimondiiChr105CH_gra_5010410.0000000190245
Gossypium raimondiiChr106CH_gra_6110410.0000000361188
Medicago truncatulachr41CH_mtr_419121.46587e-16
Medicago truncatulachr71CH_mtr_6510280.000000000000022878
Medicago truncatulachr81CH_mtr_486480.00029012
Medicago truncatulachr42CH_mtr_619120.00000000000000826859
Medicago truncatulachr72CH_mtr_10610280.00000000000199773
Medicago truncatulachr44CH_mtr_92111240.00000000628933
Medicago truncatulachr74CH_mtr_5210280.000000000000022878
Medicago truncatulachr45CH_mtr_123111240.000000758385
Medicago truncatulachr75CH_mtr_6610280.00000000000199773
Oryza sativa ssp. japonica71CH_osa_418100.0000000000000046316
Oryza sativa ssp. japonica91CH_osa_2036290.00000743298
Oryza sativa ssp. japonica72CH_osa_528100.000000000000269025
Oryza sativa ssp. japonica92CH_osa_3176290.000149062
Oryza sativa ssp. japonica73CH_osa_638100.000000000000528104
Solanum lycopersicumch032CH_sly_1767170.000000308618
Solanum tuberosumchr021CH_stu_4910102.40113e-19
Solanum tuberosumchr061CH_stu_331440.0000204231
Solanum tuberosumchr101CH_stu_496470.00070648
Solanum tuberosumchr111CH_stu_3776250.0000778559
Solanum tuberosumchr111CH_stu_330440.0000204231
Solanum tuberosumchr121CH_stu_809130.0000000000000359258
Solanum tuberosumchr121CH_stu_217550.0000000988395
Solanum tuberosumchr032CH_stu_5335100.000394555
Solanum tuberosumchr062CH_stu_480440.000190607
Solanum tuberosumchr112CH_stu_479440.000190607
Solanum tuberosumchr122CH_stu_1319130.00000000000571395
Solanum tuberosumchr122CH_stu_286550.00000162245
Solanum tuberosumchr033CH_stu_7295100.000518241
Solanum tuberosumchr024CH_stu_4210102.40113e-19
Solanum tuberosumchr124CH_stu_9210600.0000000146143
Solanum tuberosumchr125CH_stu_11410600.00000354927
Vitis viniferachr31CH_vvi_306330.00080851
Vitis viniferachr152CH_vvi_235440.000036178
Zea mays21CH_zma_835100.00000328481
Zea mays22CH_zma_1545100.0000704685

Available child term results

GO term Description Number of clusters
GO:0016598protein arginylation3
GO:0031145anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process8
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process3

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1GOPrimary GO data only.230800.001X
2GOPrimary and orthology projected GO data.230800.001X
3GOAll GO data.230800.001X
4GOPrimary GO data only.101503000.001X
5GOPrimary and orthology projected GO data.101503000.001X
6GOAll GO data.101503000.001X
7GOPrimary GO data only.230800.001V
8GOPrimary and orthology projected GO data.230800.001V
9GOAll GO data.230800.001V
10GOPrimary GO data only.101503000.001V
11GOPrimary and orthology projected GO data.101503000.001V
12GOAll GO data.101503000.001V
13InterProNo filter applied.230800.001X
14InterProNo filter applied.101503000.001X
15InterProNo filter applied.230800.001V
16InterProNo filter applied.101503000.001V
17MapManNo filter applied.230800.001X
18MapManNo filter applied.101503000.001X
19MapManNo filter applied.230800.001V
20MapManNo filter applied.101503000.001V