Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0006457
- Description
- protein folding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | scaffold00041 | 6 | CH_atr_53 | 12 | 145 | 0.00000148961 |
Eucalyptus grandis | scaffold_9 | 6 | CH_egr_250 | 11 | 129 | 0.00000870226 |
Medicago truncatula | chr8 | 1 | CH_mtr_343 | 4 | 5 | 0.000008526 |
Medicago truncatula | chr8 | 1 | CH_mtr_350 | 7 | 66 | 0.0000128021 |
Medicago truncatula | chr8 | 2 | CH_mtr_457 | 4 | 5 | 0.0000353406 |
Medicago truncatula | chr8 | 2 | CH_mtr_533 | 7 | 66 | 0.000150073 |
Medicago truncatula | chr8 | 3 | CH_mtr_597 | 4 | 5 | 0.0000675112 |
Medicago truncatula | chr8 | 3 | CH_mtr_785 | 7 | 66 | 0.000456172 |
Medicago truncatula | chr8 | 4 | CH_mtr_81 | 11 | 127 | 0.000000000704255 |
Medicago truncatula | chr8 | 5 | CH_mtr_102 | 11 | 127 | 0.0000000344617 |
Medicago truncatula | chr8 | 6 | CH_mtr_131 | 11 | 127 | 0.000000198088 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0034975 | protein folding in endoplasmic reticulum | 8 |
GO:0042026 | protein refolding | 5 |
GO:0051085 | chaperone mediated protein folding requiring cofactor | 2 |
GO:0061077 | chaperone-mediated protein folding | 2 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |