Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0006278
- Description
- RNA-dependent DNA replication
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Chlamydomonas reinhardtii | chromosome_1 | 1 | CH_cre_14 | 7 | 13 | 0.00000000350056 |
Chlamydomonas reinhardtii | chromosome_16 | 1 | CH_cre_23 | 6 | 14 | 0.00000118197 |
Chlamydomonas reinhardtii | chromosome_3 | 1 | CH_cre_21 | 6 | 13 | 0.000000678438 |
Chlamydomonas reinhardtii | chromosome_6 | 1 | CH_cre_9 | 8 | 9 | 0.0000000000000954284 |
Chlamydomonas reinhardtii | chromosome_9 | 1 | CH_cre_10 | 8 | 12 | 0.00000000000517766 |
Chlamydomonas reinhardtii | chromosome_6 | 4 | CH_cre_6 | 10 | 26 | 0.00000000000131415 |
Oryza sativa ssp. japonica | 12 | 1 | CH_osa_188 | 21 | 73 | 0.00000226726 |
Oryza sativa ssp. japonica | 8 | 1 | CH_osa_186 | 19 | 59 | 0.00000212697 |
Oryza sativa ssp. japonica | 8 | 7 | CH_osa_20 | 19 | 59 | 0.00000164052 |
Oryza sativa ssp. japonica | 10 | 10 | CH_osa_16 | 49 | 304 | 0.0000000622978 |
Oryza sativa ssp. japonica | 4 | 10 | CH_osa_62 | 32 | 207 | 0.000754871 |
Oryza sativa ssp. japonica | 4 | 10 | CH_osa_50 | 42 | 301 | 0.000225534 |
Oryza sativa ssp. japonica | 8 | 10 | CH_osa_22 | 19 | 59 | 0.00000164052 |
Oryza sativa ssp. japonica | 8 | 10 | CH_osa_14 | 47 | 273 | 0.0000000136788 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |