Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0006182
- Description
- cGMP biosynthetic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | 1 | 2 | CH_ath_44 | 6 | 16 | 0.000000000000230554 |
Arabidopsis thaliana | 1 | 3 | CH_ath_49 | 6 | 16 | 0.000000000000230554 |
Brassica rapa | A01 | 2 | CH_bra_97 | 3 | 3 | 0.00000168057 |
Brassica rapa | A01 | 3 | CH_bra_117 | 3 | 3 | 0.00000168057 |
Capsella rubella | scaffold_1 | 2 | CH_cru_226 | 3 | 11 | 0.0000806259 |
Capsella rubella | scaffold_1 | 3 | CH_cru_261 | 3 | 11 | 0.0000806259 |
Chlamydomonas reinhardtii | chromosome_7 | 1 | CH_cre_34 | 3 | 10 | 0.0000458245 |
Chlamydomonas reinhardtii | chromosome_7 | 2 | CH_cre_33 | 3 | 10 | 0.0000458245 |
Chlamydomonas reinhardtii | chromosome_7 | 3 | CH_cre_54 | 3 | 10 | 0.0000458245 |
Citrus sinensis | scaffold00031 | 2 | CH_csi_80 | 3 | 5 | 0.00000201148 |
Citrus sinensis | scaffold00031 | 3 | CH_csi_100 | 3 | 5 | 0.00000201148 |
Eucalyptus grandis | scaffold_1 | 2 | CH_egr_132 | 7 | 9 | 7.57565e-16 |
Eucalyptus grandis | scaffold_11 | 2 | CH_egr_6 | 15 | 18 | 1.14374e-39 |
Eucalyptus grandis | scaffold_3 | 2 | CH_egr_256 | 7 | 34 | 0.000000000111118 |
Eucalyptus grandis | scaffold_11 | 3 | CH_egr_8 | 15 | 18 | 1.14374e-39 |
Eucalyptus grandis | scaffold_11 | 5 | CH_egr_10 | 15 | 18 | 1.14374e-39 |
Eucalyptus grandis | scaffold_11 | 6 | CH_egr_15 | 15 | 18 | 1.14374e-39 |
Glycine max | Gm09 | 2 | CH_gma_31 | 5 | 7 | 0.00000000000000177117 |
Glycine max | Gm09 | 3 | CH_gma_41 | 5 | 7 | 0.00000000000000177117 |
Gossypium raimondii | Chr06 | 2 | CH_gra_17 | 9 | 15 | 6.15018e-22 |
Gossypium raimondii | Chr06 | 5 | CH_gra_16 | 10 | 28 | 6.43564e-22 |
Populus trichocarpa | Chr03 | 2 | CH_ptr_84 | 5 | 6 | 0.00000000000171276 |
Populus trichocarpa | Chr03 | 3 | CH_ptr_101 | 5 | 6 | 0.00000000000171276 |
Prunus persica | scaffold_3 | 2 | CH_ppe_5 | 12 | 25 | 6.0438e-31 |
Prunus persica | scaffold_3 | 5 | CH_ppe_5 | 12 | 25 | 6.0438e-31 |
Theobroma cacao | scaffold_4 | 2 | CH_tca_352 | 2 | 2 | 0.00068171 |
Theobroma cacao | scaffold_4 | 3 | CH_tca_429 | 2 | 2 | 0.00068171 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |