PLAZA 3.0 Dicots : Functional Clustering

Functional clusters

No results found

GO term	Description	Number of clusters
GO:0005997	xylulose metabolic process	2
GO:0006006	glucose metabolic process	3
GO:0006013	mannose metabolic process	24
GO:0006096	glycolysis	6
GO:0006110	regulation of glycolysis	2
GO:0009051	pentose-phosphate shunt, oxidative branch	2
GO:0009052	pentose-phosphate shunt, non-oxidative branch	3
GO:0019307	mannose biosynthetic process	5
GO:0019318	hexose metabolic process	5
GO:0042732	D-xylose metabolic process	8
GO:0046373	L-arabinose metabolic process	34
GO:2000082	regulation of L-ascorbic acid biosynthetic process	2
GO:2000083	negative regulation of L-ascorbic acid biosynthetic process	40

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
1	GO	Primary GO data only.	2	30	80	0.001	X
2	GO	Primary and orthology projected GO data.	2	30	80	0.001	X
3	GO	All GO data.	2	30	80	0.001	X
4	GO	Primary GO data only.	10	150	300	0.001	X
5	GO	Primary and orthology projected GO data.	10	150	300	0.001	X
6	GO	All GO data.	10	150	300	0.001	X
7	GO	Primary GO data only.	2	30	80	0.001	V
8	GO	Primary and orthology projected GO data.	2	30	80	0.001	V
9	GO	All GO data.	2	30	80	0.001	V
10	GO	Primary GO data only.	10	150	300	0.001	V
11	GO	Primary and orthology projected GO data.	10	150	300	0.001	V
12	GO	All GO data.	10	150	300	0.001	V
13	InterPro	No filter applied.	2	30	80	0.001	X
14	InterPro	No filter applied.	10	150	300	0.001	X
15	InterPro	No filter applied.	2	30	80	0.001	V
16	InterPro	No filter applied.	10	150	300	0.001	V
17	MapMan	No filter applied.	2	30	80	0.001	X
18	MapMan	No filter applied.	10	150	300	0.001	X
19	MapMan	No filter applied.	2	30	80	0.001	V
20	MapMan	No filter applied.	10	150	300	0.001	V