Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0005794
- Description
- Golgi apparatus
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica rapa | A06 | 3 | CH_bra_50 | 11 | 16 | 0.000000000796283 |
Brassica rapa | A06 | 5 | CH_bra_14 | 10 | 16 | 0.0000000319388 |
Brassica rapa | A06 | 6 | CH_bra_15 | 11 | 16 | 0.000000000796283 |
Capsella rubella | scaffold_6 | 2 | CH_cru_94 | 9 | 11 | 0.0000000105412 |
Capsella rubella | scaffold_6 | 3 | CH_cru_111 | 9 | 11 | 0.0000000152821 |
Eucalyptus grandis | scaffold_2 | 2 | CH_egr_632 | 13 | 80 | 0.0000958766 |
Eucalyptus grandis | scaffold_2 | 3 | CH_egr_782 | 13 | 80 | 0.000224074 |
Eucalyptus grandis | scaffold_2 | 5 | CH_egr_250 | 14 | 93 | 0.0000666346 |
Eucalyptus grandis | scaffold_2 | 6 | CH_egr_291 | 14 | 93 | 0.000164821 |
Theobroma cacao | scaffold_2 | 3 | CH_tca_421 | 5 | 6 | 0.000619191 |
Available child term results
GO term | Description | Number of clusters |
---|---|---|
GO:0000139 | Golgi membrane | 3 |
GO:0005795 | Golgi stack | 11 |
GO:0005797 | Golgi medial cisterna | 2 |
GO:0017119 | Golgi transport complex | 2 |
GO:0030126 | COPI vesicle coat | 11 |
GO:0030130 | clathrin coat of trans-Golgi network vesicle | 1 |
GO:0030173 | integral to Golgi membrane | 12 |
GO:0044431 | Golgi apparatus part | 3 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |