Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0005544
- Description
- calcium-dependent phospholipid binding
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Beta vulgaris | Bvchr2.sca016 | 1 | CH_bvu_32 | 5 | 8 | 0.0000000000289003 |
Beta vulgaris | Bvchr9.sca025 | 1 | CH_bvu_106 | 3 | 3 | 0.00000307717 |
Beta vulgaris | Bvchr2.sca016 | 2 | CH_bvu_36 | 5 | 8 | 0.0000000000289003 |
Beta vulgaris | Bvchr9.sca025 | 2 | CH_bvu_122 | 3 | 3 | 0.00000307717 |
Beta vulgaris | Bvchr2.sca016 | 3 | CH_bvu_52 | 5 | 8 | 0.000000000109541 |
Beta vulgaris | Bvchr9.sca025 | 3 | CH_bvu_166 | 3 | 3 | 0.00000636414 |
Chlamydomonas reinhardtii | chromosome_3 | 2 | CH_cre_48 | 2 | 2 | 0.000112892 |
Citrullus lanatus | Chr5 | 1 | CH_cla_44 | 4 | 4 | 0.000000000233101 |
Citrullus lanatus | Chr5 | 2 | CH_cla_50 | 4 | 4 | 0.000000000388502 |
Citrullus lanatus | Chr5 | 3 | CH_cla_71 | 4 | 4 | 0.000000000915755 |
Citrus sinensis | scaffold00003 | 1 | CH_csi_65 | 3 | 3 | 0.000000704223 |
Citrus sinensis | scaffold00003 | 2 | CH_csi_74 | 3 | 3 | 0.00000112676 |
Citrus sinensis | scaffold00003 | 3 | CH_csi_99 | 3 | 3 | 0.00000169013 |
Cucumis melo | CM3.5_scaffold00016 | 1 | CH_cme_49 | 5 | 15 | 0.000000000356497 |
Cucumis melo | CM3.5_scaffold00016 | 2 | CH_cme_50 | 5 | 15 | 0.000000000992465 |
Cucumis melo | CM3.5_scaffold00016 | 3 | CH_cme_73 | 5 | 15 | 0.00000000154334 |
Eucalyptus grandis | scaffold_6 | 1 | CH_egr_234 | 5 | 16 | 0.00000000166236 |
Fragaria vesca | LG7 | 1 | CH_fve_98 | 3 | 3 | 0.000000451778 |
Fragaria vesca | LG7 | 2 | CH_fve_116 | 3 | 3 | 0.000000645396 |
Fragaria vesca | LG7 | 3 | CH_fve_180 | 3 | 3 | 0.0000019577 |
Glycine max | Gm11 | 1 | CH_gma_228 | 3 | 4 | 0.0000333364 |
Glycine max | Gm13 | 1 | CH_gma_53 | 5 | 7 | 0.0000000000420358 |
Glycine max | Gm15 | 1 | CH_gma_49 | 5 | 6 | 0.0000000000120151 |
Glycine max | Gm11 | 2 | CH_gma_291 | 3 | 4 | 0.0000491315 |
Glycine max | Gm13 | 2 | CH_gma_70 | 5 | 7 | 0.0000000000820687 |
Glycine max | Gm15 | 2 | CH_gma_65 | 5 | 6 | 0.0000000000234591 |
Glycine max | Gm11 | 3 | CH_gma_365 | 3 | 4 | 0.0000811128 |
Glycine max | Gm13 | 3 | CH_gma_98 | 5 | 7 | 0.000000000194037 |
Glycine max | Gm15 | 3 | CH_gma_90 | 5 | 6 | 0.00000000005547 |
Gossypium raimondii | Chr09 | 1 | CH_gra_132 | 3 | 3 | 0.00000155867 |
Gossypium raimondii | Chr09 | 2 | CH_gra_160 | 3 | 3 | 0.00000291181 |
Gossypium raimondii | Chr09 | 3 | CH_gra_194 | 3 | 3 | 0.00000569515 |
Lotus japonicus | chr2 | 1 | CH_lja_25 | 3 | 4 | 0.000000271154 |
Lotus japonicus | chr2 | 2 | CH_lja_38 | 3 | 4 | 0.000000542294 |
Lotus japonicus | chr2 | 3 | CH_lja_66 | 3 | 4 | 0.00000151835 |
Malus domestica | 2 | 1 | CH_mdo_142 | 3 | 7 | 0.0000759836 |
Malus domestica | 7 | 1 | CH_mdo_28 | 4 | 5 | 0.00000000351025 |
Malus domestica | 2 | 2 | CH_mdo_164 | 3 | 7 | 0.000091174 |
Malus domestica | 7 | 2 | CH_mdo_29 | 4 | 5 | 0.00000000451309 |
Malus domestica | 2 | 3 | CH_mdo_314 | 3 | 7 | 0.000365783 |
Malus domestica | 7 | 3 | CH_mdo_65 | 4 | 5 | 0.0000000301923 |
Manihot esculenta | scaffold05875 | 1 | CH_mes_69 | 3 | 3 | 0.00000297292 |
Manihot esculenta | scaffold08873 | 1 | CH_mes_70 | 3 | 3 | 0.00000297292 |
Manihot esculenta | scaffold05875 | 2 | CH_mes_80 | 3 | 3 | 0.00000491883 |
Manihot esculenta | scaffold08873 | 2 | CH_mes_81 | 3 | 3 | 0.00000491883 |
Manihot esculenta | scaffold05875 | 3 | CH_mes_122 | 3 | 3 | 0.00000756743 |
Manihot esculenta | scaffold08873 | 3 | CH_mes_123 | 3 | 3 | 0.00000756743 |
Medicago truncatula | chr3 | 1 | CH_mtr_242 | 4 | 12 | 0.000000165937 |
Medicago truncatula | chr6 | 1 | CH_mtr_283 | 3 | 3 | 0.00000136802 |
Medicago truncatula | chr8 | 1 | CH_mtr_61 | 6 | 12 | 0.0000000000000153143 |
Medicago truncatula | chr3 | 2 | CH_mtr_279 | 4 | 12 | 0.000000207401 |
Medicago truncatula | chr6 | 2 | CH_mtr_342 | 3 | 3 | 0.00000160944 |
Medicago truncatula | chr8 | 2 | CH_mtr_71 | 6 | 12 | 0.0000000000000218758 |
Medicago truncatula | chr3 | 3 | CH_mtr_366 | 4 | 12 | 0.000000454692 |
Medicago truncatula | chr6 | 3 | CH_mtr_436 | 3 | 3 | 0.00000285746 |
Medicago truncatula | chr8 | 3 | CH_mtr_104 | 6 | 12 | 0.0000000000000759408 |
Populus trichocarpa | Chr01 | 1 | CH_ptr_187 | 3 | 3 | 0.00000135425 |
Populus trichocarpa | Chr01 | 2 | CH_ptr_222 | 3 | 3 | 0.00000208346 |
Populus trichocarpa | Chr01 | 3 | CH_ptr_292 | 3 | 3 | 0.00000303589 |
Prunus persica | scaffold_2 | 1 | CH_ppe_178 | 3 | 3 | 0.00000128612 |
Prunus persica | scaffold_2 | 2 | CH_ppe_207 | 3 | 3 | 0.00000171483 |
Prunus persica | scaffold_2 | 3 | CH_ppe_265 | 3 | 3 | 0.00000354657 |
Prunus persica | scaffold_2 | 3 | CH_ppe_266 | 3 | 3 | 0.00000354657 |
Ricinus communis | 30131 | 1 | CH_rco_92 | 3 | 3 | 0.00000081004 |
Ricinus communis | 30131 | 2 | CH_rco_108 | 3 | 3 | 0.00000121506 |
Ricinus communis | 30131 | 3 | CH_rco_144 | 3 | 3 | 0.0000017358 |
Solanum lycopersicum | ch01 | 1 | CH_sly_123 | 4 | 5 | 0.00000000515482 |
Solanum lycopersicum | ch01 | 2 | CH_sly_124 | 4 | 5 | 0.00000000515482 |
Solanum lycopersicum | ch01 | 3 | CH_sly_167 | 4 | 5 | 0.00000000674076 |
Solanum tuberosum | chr01 | 1 | CH_stu_150 | 4 | 4 | 0.000000000274043 |
Solanum tuberosum | chr01 | 2 | CH_stu_168 | 4 | 4 | 0.000000000554176 |
Solanum tuberosum | chr01 | 3 | CH_stu_236 | 4 | 4 | 0.00000000100759 |
Thellungiella parvula | ch4-6 | 1 | CH_tpa_16 | 4 | 4 | 0.000000000189731 |
Thellungiella parvula | ch4-6 | 2 | CH_tpa_27 | 4 | 4 | 0.000000000316219 |
Thellungiella parvula | ch4-6 | 3 | CH_tpa_33 | 4 | 4 | 0.000000000745373 |
Theobroma cacao | scaffold_10r | 1 | CH_tca_96 | 5 | 31 | 0.0000000546966 |
Theobroma cacao | scaffold_10r | 2 | CH_tca_111 | 5 | 31 | 0.0000000819843 |
Theobroma cacao | scaffold_10r | 3 | CH_tca_167 | 5 | 31 | 0.000000168688 |
Vitis vinifera | chr13_random | 1 | CH_vvi_232 | 3 | 5 | 0.000130523 |
Vitis vinifera | chrUn | 1 | CH_vvi_10 | 13 | 18 | 2.12415e-34 |
Vitis vinifera | chr13_random | 2 | CH_vvi_271 | 3 | 5 | 0.000150093 |
Vitis vinifera | chrUn | 2 | CH_vvi_8 | 13 | 18 | 4.88468e-34 |
Vitis vinifera | chr13_random | 3 | CH_vvi_373 | 3 | 5 | 0.000194904 |
Vitis vinifera | chrUn | 3 | CH_vvi_13 | 13 | 18 | 2.21953e-33 |
Vitis vinifera | chrUn | 4 | CH_vvi_9 | 13 | 18 | 2.12415e-34 |
Vitis vinifera | chrUn | 5 | CH_vvi_8 | 13 | 18 | 4.88468e-34 |
Vitis vinifera | chrUn | 6 | CH_vvi_15 | 13 | 18 | 2.21953e-33 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
2 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | X |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
4 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | X |
5 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | X |
6 | GO | All GO data. | 10 | 150 | 300 | 0.001 | X |
7 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
8 | GO | Primary and orthology projected GO data. | 2 | 30 | 80 | 0.001 | V |
9 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |
10 | GO | Primary GO data only. | 10 | 150 | 300 | 0.001 | V |
11 | GO | Primary and orthology projected GO data. | 10 | 150 | 300 | 0.001 | V |
12 | GO | All GO data. | 10 | 150 | 300 | 0.001 | V |
13 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
14 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | X |
15 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
16 | InterPro | No filter applied. | 10 | 150 | 300 | 0.001 | V |
17 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | X |
18 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | X |
19 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | V |
20 | MapMan | No filter applied. | 10 | 150 | 300 | 0.001 | V |